Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins-Reference-Cited by-同舟云学术

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Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins

Published:2014-11-20 Issue:3 Volume:43 Page:e15-e15
ISSN:1362-4962
Container-title:Nucleic Acids Research
language:en
Short-container-title:

Author:

Croucher Nicholas J.,Page Andrew J.,Connor Thomas R.,Delaney Aidan J.,Keane Jacqueline A.,Bentley Stephen D.,Parkhill Julian,Harris Simon R.

Publisher

Oxford University Press (OUP)

Subject

Genetics

Link

http://academic.oup.com/nar/article-pdf/43/3/e15/17434897/gku1196.pdf

Reference58 articles.

1. How clonal are bacteria?;Smith;Proc. Natl Acad. Sci. U.S.A.,1993

2. Evolution, population structure, and phylogeography of genetically monomorphic bacterial pathogens;Achtman;Annu. Rev. Microbiol.,2008

3. High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi;Holt;Nat. Genet.,2008

4. Evolution of MRSA during hospital transmission and intercontinental spread;Harris;Science,2010

5. A bimodal pattern of relatedness between the Salmonella Paratyphi A and Typhi genomes: convergence or divergence by homologous recombination?;Didelot;Genome Res.,2007

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