Metagenome-assembled genome (MAG) of Oceancaulis alexandrii NP7 isolated from Mediterranean Sea polluted marine sediments and its bioremediation potential

Author:

Dell’Anno Filippo1,van Zyl Leonardo Joaquim2,Trindade Marla2,Brunet Christophe1,Dell’Anno Antonio3,Ianora Adrianna1,Sansone Clementina1

Affiliation:

1. Stazione Zoologica Anton Dohrn, Istituto Nationale di Biologia, Ecologia e Biotecnologie marine, 80121 Naples, Italy

2. Department of Biotechnology, Institute for Microbial Biotechnology and Metagenomics (IMBM), University of the Western Cape, 7535 Bellville, Cape Town, South Africa

3. Department of Life and Environmental Science, Università Politecnica delle Marche, 6031 Ancona, Italy

Abstract

Abstract Oceanicaulis alexandrii strain NP7 is a marine bacterium which belongs to the Hyphomonadaceae family and was isolated from sediments highly contaminated with metals and polycyclic aromatic hydrocarbons released for decades by industrial activities in the Gulf of Naples (Mediterranean Sea). Here, we report the partial genome sequence and annotation of O. alexandrii strain NP7 that contains a chromosome of 2,954,327 bp and encodes for 2914 predicted coding sequences (CDSs) and 44 RNA-encoding genes. Although the presence of some CDSs for genes involved in hydrocarbon degradation processes (e.g., alkB) have already been described in the literature associated with the Oceanicaulis, this is the first time that more than 100 genes involved in metal detoxification processes and hydrocarbon degradation are reported belonging to this genus. The presence of a heterogeneous set of genes involved in stress response, hydrocarbon degradation, heavy metal resistance, and detoxification suggests a possible role for O. alexandrii NP7 in the bioremediation of these highly contaminated marine sediments.

Funder

UNIVPM

Italian Ministry for Education, University and Research

Ocean Medicines

MERCES

Publisher

Oxford University Press (OUP)

Subject

Genetics(clinical),Genetics,Molecular Biology

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