The Effects of Graded Levels of Calorie Restriction XV: Phase Space Attractors Reveal Distinct Behavioral Phenotypes

Author:

Sun Deshun12,Liu Fei1ORCID,Mitchell Sharon E3,Ma Huanfei4,Derous Davina3ORCID,Wang Yingchun5,Han Jackie J D6,Promislow Daniel E L78,Lusseau David3,Douglas Alex3,Speakman John R359,Chen Luonan10119

Affiliation:

1. School of Software Engineering, South China University of Technology, Guangzhou, P. R. China

2. Shenzhen Key Laboratory of Tissue Engineering, Shenzhen Laboratory of Digital Orthopedic Engineering, Shenzhen Second People’s Hospital/the First Affiliated Hospital of Shenzhen University Health Science Center, Shenzhen, P. R. China

3. Institute of Biological and Environmental Sciences, University of Aberdeen, UK

4. School of Mathematical Sciences, Soochow University, Suzhou, P. R. China

5. State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, P. R. China

6. Key Laboratory of Computational Biology, Chinese Academy of Sciences–Max Planck Partner Institute for Computational Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, P. R. China

7. Department of Pathology, University of Washington, Seattle

8. Department of Biology, University of Washington, Seattle

9. Center for Excellence in Animal Evolution and Genetics, Chinese Academy of Sciences, Kunming, P. R. China

10. Key Laboratory of Systems Biology, Center for Excellence in Molecular Cell Science, Institute of Biochemistry and Cell Biology, Shanghai Institute of Biological Sciences, Chinese Academy of Sciences, Shanghai, P. R. China

11. School of Life Science and Technology, Shanghai Tech University, Shanghai, P. R. China

Abstract

AbstractCalorie restriction (CR) has a positive impact on health and life span. Previous work, however, does not reveal the whole underlying mechanism of behavioral phenotypes under CR. We propose a new approach based on phase space reconstruction (PSR) to analyze the behavioral responses of mice to graded CR. This involved reconstructing high-dimensional attractors which topologically represent the intrinsic dynamics of mice based on low-dimensional time series of movement counts observed during the 90-day time course of restriction. PSR together with correlation dimensions (CD), Kolmogorov entropy (KE), and multifractal spectra builds a map from internal attractors to the phenotype of mice and reveals the mice with increasing CR levels undergo significant changes from a normal to a new state. Features of the attractors (CD and KE) were significantly associated with gene expression profiles in the hypothalamus of the same individuals.

Funder

National Key R&D Program of China

National Natural Science Foundation of China

Natural Science Foundation of Guangdong Province of China

Shanghai Municipal Science and Technology

Science and Technology Program of Guangzhou

Pre-Research Foundation of China

BBSRC

KC Wong foundation

Royal Society

Publisher

Oxford University Press (OUP)

Subject

Geriatrics and Gerontology,Ageing

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