A machine-learning-guided adaptive algorithm to reduce the computational cost of integrating kinetics in global atmospheric chemistry models: application to GEOS-Chem versions 12.0.0 and 12.9.1
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Published:2022-02-25
Issue:4
Volume:15
Page:1677-1687
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ISSN:1991-9603
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Container-title:Geoscientific Model Development
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language:en
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Short-container-title:Geosci. Model Dev.
Author:
Shen Lu, Jacob Daniel J., Santillana Mauricio, Bates KelvinORCID, Zhuang Jiawei, Chen Wei
Abstract
Abstract. Global modeling of atmospheric chemistry is a great
computational challenge because of the cost of integrating the kinetic
equations for chemical mechanisms with typically over 100 coupled species.
Here we present an adaptive algorithm to ease this computational bottleneck
with no significant loss in accuracy and apply it to the GEOS-Chem global
3-D model for tropospheric and stratospheric chemistry (228 species, 724
reactions). Our approach is inspired by unsupervised machine learning
clustering techniques and traditional asymptotic analysis ideas. We locally
define species in the mechanism as fast or slow on the basis of their total
production and loss rates, and we solve the coupled kinetic system only for
the fast species assembled in a submechanism of the full mechanism. To avoid
computational overhead, we first partition the species from the full
mechanism into 13 blocks, using a machine learning approach that analyzes
the chemical linkages between species and their correlated presence as fast
or slow in the global model domain. Building on these blocks, we then
preselect 20 submechanisms, as defined by unique assemblages of the species
blocks, and then pick locally and on the fly which submechanism to use in
the model based on local chemical conditions. In each submechanism, we
isolate slow species and slow reactions from the coupled system of fast
species to be solved. Because many species in the full mechanism are
important only in source regions, we find that we can reduce the effective
size of the mechanism by 70 % globally without sacrificing complexity
where/when it is needed. The computational cost of the chemical integration
decreases by 50 % with relative biases smaller than 2 % for important
species over 8-year simulations. Changes to the full mechanism including
the addition of new species can be accommodated by adding these species to the
relevant blocks without having to reconstruct the suite of submechanisms.
Funder
Earth Sciences Division National Center For Environmental Assessment
Publisher
Copernicus GmbH
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