Functional diversity of NLRP3 gain-of-function mutants associated with CAPS autoinflammation

Author:

Cosson Camille1ORCID,Riou Romane1ORCID,Patoli Danish1ORCID,Niu Tingting12ORCID,Rey Amaury1ORCID,Groslambert Marine1ORCID,De Rosny Charlotte1ORCID,Chatre Elodie3ORCID,Allatif Omran1ORCID,Henry Thomas1ORCID,Venet Fabienne1ORCID,Milhavet Florian456ORCID,Boursier Guilaine456ORCID,Belot Alexandre1678ORCID,Jamilloux Yvan1689,Merlin Etienne10ORCID,Duquesne Agnès67ORCID,Grateau Gilles611,Savey Léa611ORCID,Jacques Maria Alexandre Thibault12ORCID,Pagnier Anne13ORCID,Poutrel Solène14ORCID,Lambotte Olivier1516ORCID,Mallebranche Coralie1718ORCID,Ardois Samuel19ORCID,Richer Olivier20ORCID,Lemelle Irène21ORCID,Rieux-Laucat Frédéric22ORCID,Bader-Meunier Brigitte2223ORCID,Amoura Zahir24ORCID,Melki Isabelle202526ORCID,Cuisset Laurence27ORCID,Touitou Isabelle456ORCID,Geyer Matthias28ORCID,Georgin-Lavialle Sophie611ORCID,Py Bénédicte F.1ORCID

Affiliation:

1. CIRI, Centre International de Recherche en Infectiologie, Univ Lyon, Inserm, U1111, Université Claude Bernard Lyon 1, CNRS, UMR5308 1 , ENS de Lyon, Lyon, France

2. Tongji University Cancer Center, Shanghai Tenth People’s Hospital, School of Medicine, Tongji University 2 , Shanghai, China

3. Univ Lyon, ENS de Lyon, Inserm, CNRS SFR Biosciences US8 UAR3444, Université Claude Bernard Lyon 1 3 , Lyon, France

4. Institute for Regenerative Medicine and Biotherapy, Inserm, U1183, University of Montpellier 4 , Montpellier, France

5. Medical Genetics of Rare and Autoinflammatory Disease Unit, Montpellier University Hospital 5 Department of Molecular Genetics, , Montpellier, France

6. Centre de Référence des Maladies Autoinflammatoires et des Amyloses Inflammatoires, CEREMAIA 6 , France

7. National Referee Centre for Rheumatic and Autoimmune Diseases in Children (RAISE), Hôpital Femme-Mère-Enfant, Hospices Civils de Lyon 7 Pediatric Nephrology, Rheumatology, Dermatology Department, , Bron, France

8. Lyon Immunopathology Federation (LIFE), Université Claude Bernard Lyon 1 8 , Lyon, France

9. Service de Médecine Interne, Hôpital de la Croix-Rousse, Hospices Civils de Lyon 9 , Lyon, France

10. Clermont-Ferrand University Hospital 10 Department of Pediatrics, , Clermont-Ferrand, France

11. Sorbonne Université, Department of Internal Medicine, National Reference Center for Autoinflammatory Diseases and AA Amyloidosis, Tenon Hospital, Assistance Publique-Hôpitaux de Paris 11 , Paris, France

12. Internal Medicine and Onco-Immunology (MedI2O), Institute for Regenerative Medicine and Biotherapy (IRMB), Saint Eloi Hospital, Montpellier University 12 , Montpellier, France

13. Centre Hospitalier Universitaire Grenoble Alpes, Immunologie Clinique, Immuno-Hémato-Oncologie (IHO), Hôpital Couple-Enfant 13 , Grenoble, France

14. Service de Médecine Interne, Hospices Civils de Lyon, Edouard Herriot Hospital 14 , Lyon, France

15. Assistance Publique-Hôpitaux de Paris, Service de Médecine Interne et Immunologie Clinique, Groupe Hospitalier Universitaire Paris Saclay, Hôpital Bicêtre 15 , Le Kremlin-Bicêtre, France

16. Université Paris Saclay, Inserm UMR, 1184, CEA 16 , Le Kremlin-Bicêtre, France

17. Université d’Angers, Université de Nantes, Inserm, CNRS, CRCI2NA, SFR ICAT, Angers, France 17

18. 28Centre Hospitalier Universitaire d'Angers, Pediatric Immuno-Hemato-Oncology Unit, France

19. Médecine Interne et Immunologie Clinique 18 , Centre Hospitalier Universitaire de Rennes, Rennes, France

20. Paediatric, Rheumatology and Paediatric Internal Medicine, Reference Center for Rheumatic, Autoimmune and Systemic Diseases in Children (RAISE), Children’s Hospital 19 , Bordeaux, France

21. Children Hospital, University Hospital of Nancy, Lorraine University 20 Department of Pediatric Onco-hematology, , Vandoeuvre-lès-Nancy, France

22. Université Paris Cité, Institut Imagine, Laboratory of Immunogenetics of Pediatric Autoimmune Diseases, Inserm UMR 1163 21 , Paris, France

23. Hôpital Necker, Assistance Publique-Hôpitaux de Paris (AP-HP) 22 Pediatric Immunology, Hematology and Rheumatology Department, , Paris, France

24. Assistance Publique-Hôpitaux de Paris (AP-HP)-Sorbonne Université, Hopital Pitié-Salpétrière, Institut E3M, Service de Médecine Interne 2, Centre National de Référence Lupus et Syndrome des Anticorps Antiphospholipides, Centre d’Immunologie et des Maladies Infectieuses 23 (CIMI), Paris, France

25. Hôpital Robert Debre, Assistance Publique-Hôpitaux de Paris (AP-HP), Reference Center for Rheumatic, AutoImmune and Systemic Diseases in Children 24 General Pediatrics, Infectious Disease and Internal Medicine Department, (RAISE), Paris, France

26. Laboratory of Neurogenetics and Neuroinflammation, Imagine Institute 25 , Paris, France

27. Université Paris Cité, Service de Médecine Génomique des Maladies de Système et D’Organe, Hôpital Cochin, Assistance Publique-Hôpitaux de Paris 26 , Paris, France

28. Institute of Structural Biology, University of Bonn 27 , Bonn, Germany

Abstract

NLRP3-associated autoinflammatory disease is a heterogenous group of monogenic conditions caused by NLRP3 gain-of-function mutations. The poor functional characterization of most NLRP3 variants hinders diagnosis despite efficient anti-IL-1 treatments. Additionally, while NLRP3 is controlled by priming and activation signals, gain-of-functions have only been investigated in response to priming. Here, we characterize 34 NLRP3 variants in vitro, evaluating their activity upon induction, priming, and/or activation signals, and their sensitivity to four inhibitors. We highlight the functional diversity of the gain-of-function mutants and describe four groups based on the signals governing their activation, correlating partly with the symptom severity. We identify a new group of NLRP3 mutants responding to the activation signal without priming, associated with frequent misdiagnoses. Our results identify key NLRP3 residues controlling inflammasome activity and sensitivity to inhibitors, and antagonistic mechanisms with broader efficacy for therapeutic strategies. They provide new insights into NLRP3 activation, an explanatory mechanism for NLRP3-AID heterogeneity, and original tools for NLRP3-AID diagnosis and drug development.

Funder

Institut National de la Santé et de la Recherche Médicale

Centre National de la Recherche scientifique

École Normale Supérieure

Université Claude Bernard Lyon 1

European Research Council

Agence Nationale de la Recherche

Institut Hospitalo-Universitaire Imagine

Recherche Hospitalo-Universitaire

Fondation pour la Recherche Médicale

Deutsche Forschungsgemeinschaft

Germany’s Excellence Strategy

Publisher

Rockefeller University Press

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