Design and crystal structure of a native-like HIV-1 envelope trimer that engages multiple broadly neutralizing antibody precursors in vivo

Author:

Medina-Ramírez Max1ORCID,Garces Fernando2,Escolano Amelia3,Skog Patrick4ORCID,de Taeye Steven W.1,Del Moral-Sanchez Ivan1,McGuire Andrew T.5ORCID,Yasmeen Anila6ORCID,Behrens Anna-Janina7ORCID,Ozorowski Gabriel2ORCID,van den Kerkhof Tom L.G.M.18,Freund Natalia T.3,Dosenovic Pia2,Hua Yuanzi2,Gitlin Alexander D.3,Cupo Albert6,van der Woude Patricia1,Golabek Michael6ORCID,Sliepen Kwinten1,Blane Tanya4ORCID,Kootstra Neeltje8ORCID,van Breemen Mariëlle J.1,Pritchard Laura K.7,Stanfield Robyn L.2ORCID,Crispin Max7,Ward Andrew B.2,Stamatatos Leonidas5,Klasse Per Johan6ORCID,Moore John P.6ORCID,Nemazee David4ORCID,Nussenzweig Michel C.39ORCID,Wilson Ian A.2,Sanders Rogier W.16

Affiliation:

1. Department of Medical Microbiology, Academic Medical Center, University of Amsterdam, Amsterdam, Netherlands

2. Department of Integrative Structural and Computational Biology, Scripps CHAVI-ID, IAVI Neutralizing Antibody Center and Collaboration for AIDS Vaccine Discovery (CAVD), The Scripps Research Institute, La Jolla, CA

3. Laboratory of Molecular Immunology, The Rockefeller University, New York, NY

4. Department of Immunology and Microbiology, Scripps CHAVI-ID, The Scripps Research Institute, La Jolla, CA

5. Seattle Biomedical Research Institute, Seattle, WA

6. Department of Microbiology and Immunology, Weill Medical College of Cornell University, New York, NY

7. Oxford Glycobiology Institute, Department of Biochemistry, University of Oxford, Oxford, England, UK

8. Department of Experimental Immunology, Academic Medical Center, University of Amsterdam, Amsterdam, Netherlands

9. Howard Hughes Medical Institute, The Rockefeller University, New York, NY

Abstract

Induction of broadly neutralizing antibodies (bNAbs) by HIV-1 envelope glycoprotein immunogens would be a major advance toward an effective vaccine. A critical step in this process is the activation of naive B cells expressing germline (gl) antibody precursors that have the potential to evolve into bNAbs. Here, we reengineered the BG505 SOSIP.664 glycoprotein to engage gl precursors of bNAbs that target either the trimer apex or the CD4-binding site. The resulting BG505 SOSIP.v4.1-GT1 trimer binds multiple bNAb gl precursors in vitro. Immunization experiments in knock-in mice expressing gl-VRC01 or gl-PGT121 show that this trimer activates B cells in vivo, resulting in the secretion of specific antibodies into the sera. A crystal structure of the gl-targeting trimer at 3.2-Å resolution in complex with neutralizing antibodies 35O22 and 9H+109L reveals a native-like conformation and the successful incorporation of design features associated with binding of multiple gl-bNAb precursors.

Funder

Netherlands National Institute for Public Health and the Environment

National Cancer Institute

National Institute of General Medical Sciences

U.S. Department of Energy

Consejo Nacional de Ciencia y Tecnología

Netherlands Organization for Scientific Research

European Research Council

National Institutes of Health

Neutralizing Antibody Consortium

Center for HIV/AIDS Vaccine Immunology and Immunogen Discovery

Collaboration for AIDS Vaccine Discovery

Bill and Melinda Gates Foundation

European Union Horizon 2020

International AIDS Vaccine Initiative

Aids Fonds Netherlands

Publisher

Rockefeller University Press

Subject

Immunology,Immunology and Allergy

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