Transcriptome analysis provides a blueprint of coral egg and sperm functions

Author:

Van Etten Julia1,Shumaker Alexander2,Mass Tali3,Putnam Hollie M.4,Bhattacharya Debashish5

Affiliation:

1. Graduate Program in Ecology and Evolution, Rutgers, The State University of New Jersey, New Brunswick, NJ, United States of America

2. Microbial Biology Graduate Program, Rutgers, The State University of New Jersey, New Brunswick, NJ, United States of America

3. Department of Marine Biology, University of Haifa, Haifa, Israel

4. Department of Biological Sciences, University of Rhode Island, Kingston, RI, United States of America

5. Department of Biochemistry and Microbiology, Rutgers, The State University of New Jersey, New Brunswick, NJ, United States of America

Abstract

Background Reproductive biology and the evolutionary constraints acting on dispersal stages are poorly understood in many stony coral species. A key piece of missing information is egg and sperm gene expression. This is critical for broadcast spawning corals, such as our model, the Hawaiian species Montipora capitata, because eggs and sperm are exposed to environmental stressors during dispersal. Furthermore, parental effects such as transcriptome investment may provide a means for cross- or trans-generational plasticity and be apparent in egg and sperm transcriptome data. Methods Here, we analyzed M. capitata egg and sperm transcriptomic data to address three questions: (1) Which pathways and functions are actively transcribed in these gametes? (2) How does sperm and egg gene expression differ from adult tissues? (3) Does gene expression differ between these gametes? Results We show that egg and sperm display surprisingly similar levels of gene expression and overlapping functional enrichment patterns. These results may reflect similar environmental constraints faced by these motile gametes. We find significant differences in differential expression of egg vs. adult and sperm vs. adult RNA-seq data, in contrast to very few examples of differential expression when comparing egg vs. sperm transcriptomes. Lastly, using gene ontology and KEGG orthology data we show that both egg and sperm have markedly repressed transcription and translation machinery compared to the adult, suggesting a dependence on parental transcripts. We speculate that cell motility and calcium ion binding genes may be involved in gamete to gamete recognition in the water column and thus, fertilization.

Funder

US National Science Foundation

Israeli Binational Science Foundation

NIFA-USDA Hatch

Publisher

PeerJ

Subject

General Agricultural and Biological Sciences,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

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