Insight into Shiga toxin genes encoded byEscherichia coliO157 from whole genome sequencing
Author:
Affiliation:
1. Gastrointestinal Bacteria Reference Unit, Public Health England, London, UK
2. Animal & Plant Health Agency, New Haw, Addlestone, Surrey, UK
3. University of East Anglia, Norwich Research Park, Norwich, UK
Publisher
PeerJ
Subject
General Agricultural and Biological Sciences,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience
Link
https://peerj.com/articles/739.pdf
Reference22 articles.
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2. Phylogenetic diversity and similarity of active sites of Shiga toxin (Stx) in Shiga toxin-producing Escherichia coli (STEC);Asakura;Epidemiology and Infection,2001
3. Trimmomatic: a flexible trimmer for Illumina sequence data;Bolger;Bioinformatics,2014
4. Fragment assembly with short reads;Chaisson;Bioinformatics,2004
5. Biopython: freely available Python tools for computational molecular biology and bioinformatics;Cock;Bioinformatics,2009
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