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Comparison of Pseudoknotted RNA Secondary Structures by Topological Centroid Identification and Tree Edit Distance

  • Published:2020-09-01 Issue:9 Volume:27 Page:1443-1451
  • ISSN:1557-8666
  • Container-title:Journal of Computational Biology
  • language:en
  • Short-container-title:Journal of Computational Biology

Author:

Wang Feiqi1,Akutsu Tatsuya1,Mori Tomoya1

Affiliation:

1. Bioinformatics Center, Institute for Chemical Research, Kyoto University, Kyoto, Japan.

Publisher

Mary Ann Liebert Inc

Subject

Computational Theory and Mathematics,Computational Mathematics,Genetics,Molecular Biology,Modeling and Simulation

Cited by 6 articles. 订阅此论文施引文献 订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Optimized RNA structure alignment algorithm based on longest arc-preserving common subsequence;AIMS Mathematics;2024

2. Automatic generation of pseudoknotted RNAs taxonomy;BMC Bioinformatics;2023-06-15

3. The edge-preservation similarity for comparing rooted, unordered, node-labeled trees;Pattern Recognition Letters;2023-03

4. Metrics for RNA Secondary Structure Comparison;Methods in Molecular Biology;2023

5. Visualization of RNA secondary structure with pseudoknots;International Journal of Wavelets, Multiresolution and Information Processing;2021-08-30
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