Toward More Transparent and Reproducible Omics Studies Through a Common Metadata Checklist and Data Publications

Author:

Kolker Eugene123,Özdemir Vural345,Martens Lennart367,Hancock William38,Anderson Gordon39,Anderson Nathaniel13,Aynacioglu Sukru310,Baranova Ancha311,Campagna Shawn R.312,Chen Rui313,Choiniere John13,Dearth Stephen P.312,Feng Wu-Chun3141516,Ferguson Lynnette317,Fox Geoffrey318,Frishman Dmitrij319,Grossman Robert32021,Heath Allison32022,Higdon Roger123,Hutz Mara H.323,Janko Imre324,Jiang Lihua313,Joshi Sanjay325,Kel Alexander326,Kemnitz Joseph W.32728,Kohane Isaac S.32930,Kolker Natali2324,Lancet Doron331,Lee Elaine324,Li Weizhong332,Lisitsa Andrey33334,Llerena Adrian335,MacNealy-Koch Courtney13,Marshall Jean-Claude336,Masuzzo Paola367,May Amanda312,Mias George313,Monroe Matthew337,Montague Elizabeth123,Mooney Sean338,Nesvizhskii Alexey33940,Noronha Santosh341,Omenn Gilbert342434445,Rajasimha Harsha346,Ramamoorthy Preveen347,Sheehan Jerry348,Smarr Larry348,Smith Charles V.349,Smith Todd350,Snyder Michael31351,Rapole Srikanth352,Srivastava Sanjeeva353,Stanberry Larissa123,Stewart Elizabeth13,Toppo Stefano354,Uetz Peter355,Verheggen Kenneth367,Voy Brynn H.356,Warnich Louise357,Wilhelm Steven W.358,Yandl Gregory13

Affiliation:

1. Bioinformatics and High-Throughput Analysis Laboratory, Seattle Children's Research Institute, Seattle, Washington.

2. Predictive Analytics, Seattle Children's, Seattle, Washington.

3. Data-Enabled Life Sciences Alliance (DELSA Global), Seattle, Washington.

4. Office of the President, Gaziantep University, International Affairs and Global Development Strategy.

5. Faculty of Communications, Universite Bulvarı, Kilis Yolu, Turkey.

6. Department of Medical Protein Research, Vlaams Instituut voor Biotechnologie, Ghent, Belgium.

7. Department of Biochemistry, Ghent University; Ghent, Belgium.

8. Department of Chemistry, Barnett Institute, Northeastern University, Boston, Massachusetts.

9. Fundamental and Computational Sciences Directorate, Pacific Northwest National Laboratory, Richland, Washington.

10. Department of Pharmacology, Gaziantep University, Gaziantep, Turkey.

11. School of Systems Biology, George Mason University, Manassas, Virginia.

12. Department of Chemistry, University of Tennessee Knoxville, Knoxville, Tennessee.

13. Department of Genetics, Stanford University, Stanford, California.

14. Department of Computer Science, Virginia Tech, Blacksburg, Virginia.

15. Department of Electrical and Computer Engineering, Virginia Tech, Blacksburg, Virginia.

16. Department of SyNeRGy Laboratory, Virginia Tech, Blacksburg, Virginia.

17. Department of Nutrition, Auckland Cancer Society Research Centre, University of Auckland, Auckland, New Zealand.

18. School of Informatics and Computing, Indiana University, Bloomington, Indiana.

19. Technische Universitat Munchen, Wissenshaftzentrum Weihenstephan, Freising, Germany.

20. Institute for Genomics and Systems Biology, University of Chicago, Chicago, Illinois.

21. Department of Medicine, University of Chicago, Chicago, Illinois.

22. Knapp Center for Biomedical Discovery, University of Chicago, Chicago, Illinois.

23. Departamento de Genetica, Instituto de Biociencias, Federal University of Rio Grande do Sul, Porto Alegre, Brazil.

24. High-Throughput Analysis Core, Seattle Children's Research Institute, Seattle, Washington.

25. Life Sciences, EMC, Hopkinton, Massachusetts.

26. GeneXplain GmbH, Wolfenbüttel, Germany.

27. Department of Cell and Regenerative Biology, University of Wisconsin-Madison, Madison, Wisconsin.

28. Wisconsin National Primate Research Center, University of Wisconsin-Madison, Madison, Wisconsin.

29. Pediatrics and Health Sciences Technology, Children's Hospital and Harvard Medical School, Boston, Massachusetts.

30. HMS Center for Biomedical Informatics, Countway Library of Medicine, Boston, Massachusetts.

31. Department of Molecular Genetics, Crown Human Genome Center, Weizmann Institute of Science, Rehovot, Israel.

32. Center for Research in Biological Systems, University of California, San Diego, La Jolla, California.

33. Russian Human Proteome Organization (RHUPO), Moscow, Russia.

34. Institute of Biomedical Chemistry, Moscow, Russia.

35. Clinical Research Center, Extremadura University Hospital and Medical School, Badajoz, Spain.

36. Center for Translational Research, Catholic Health Initiatives, Towson, Maryland.

37. Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington.

38. The Buck Institute for Research on Aging, Novato, California.

39. Department of Pathology, University of Michigan, Ann Arbor, Michigan.

40. Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan.

41. Department of Chemical Engineering, Indian Institute of Technology Bombay, Powai, Mumbai, India.

42. Center for Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor Michigan.

43. Department of Molecular Medicine & Genetics and Human Genetics, University of Michigan, Ann Arbor Michigan.

44. Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor Michigan.

45. School of Public Health, University of Michigan, Ann Arbor Michigan.

46. Jeeva Informatics Solutions LLC, Derwood, Maryland.

47. Molecular Diagnostics Department, National Jewish Health, Denver, Colorado.

48. California Institute for Telecommunications and Information Technology, University of California-San Diego, La Jolla, California.

49. Center for Developmental Therapeutics, Seattle Children's Research Institute, Seattle, Washington.

50. Digital World Biology, Seattle, Washington.

51. Stanford Center for Genomics and Personalized Medicine, Stanford University, Stanford, California.

52. Proteomics Laboratory, National Centre for Cell Science, University of Pune, Pune, India.

53. Proteomics Laboratory, Indian Institute of Technology Bombay, Mumbai, India.

54. Department of Molecular Medicine, University of Padova, Padova, Italy.

55. Center for the Study of Biological Complexity (CSBC), Virginia Commonwealth University, Richmond, Virginia.

56. Department of Animal Science, University of Tennessee Institute of Agriculture, Knoxville, Tennessee.

57. Department of Genetics, Faculty of AgriSciences, University of Stellenbosch, Stellenbosch, South Africa.

58. Department of Microbiology, University of Tennessee-Knoxville, Knoxville, Tennessee.

Publisher

Mary Ann Liebert Inc

Subject

Genetics,Molecular Biology,Molecular Medicine,Biochemistry,Biotechnology

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