Cotranscriptional Kinetic Folding of RNA Secondary Structures Including Pseudoknots
Author:
Affiliation:
1. Department of Computer Science, Aalto University, Espoo, Finland.
2. Certara UK Limited (Simcyp Division), Sheffield, United Kingdom.
Publisher
Mary Ann Liebert Inc
Subject
Computational Theory and Mathematics,Computational Mathematics,Genetics,Molecular Biology,Modeling and Simulation
Link
https://www.liebertpub.com/doi/pdf/10.1089/cmb.2020.0606
Reference45 articles.
1. Dynamic programming algorithms for RNA secondary structure prediction with pseudoknots
2. RNA dynamics: it is about time
3. Improved free energy parameters for RNA pseudoknotted secondary structure prediction
4. In vitro recombination and terminal elongation of RNA by Q beta replicase.
5. Delay-induced stochastic oscillations in gene regulation
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1. A guide to computational cotranscriptional folding featuring the SRP RNA;2023-06-05
2. DrTransformer: heuristic cotranscriptional RNA folding using the nearest neighbor energy model;Bioinformatics;2023-01-01
3. A Guide to Computational Cotranscriptional Folding Featuring the SRP RNA;Methods in Molecular Biology;2012-02-24
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