Imputing Metagenomic Hi-C Contacts Facilitates the Integrative Contig Binning Through Constrained Random Walk with Restart
Author:
Affiliation:
1. Department of Quantitative and Computational Biology, University of Southern California, Los Angeles, California, USA.
Publisher
Mary Ann Liebert Inc
Link
https://www.liebertpub.com/doi/pdf/10.1089/cmb.2024.0663
Reference50 articles.
1. Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes
2. MetaTOR: A Computational Pipeline to Recover High-Quality Metagenomic Bins From Mammalian Gut Proximity-Ligation (meta3C) Libraries
3. Strain- and plasmid-level deconvolution of a synthetic metagenome by sequencing proximity ligation products
4. Generating lineage-resolved, complete metagenome-assembled genomes from complex microbial communities
5. Assignment of virus and antimicrobial resistance genes to microbial hosts in a complex microbial community by combined long-read assembly and proximity ligation
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