SCOTv2: Single-Cell Multiomic Alignment with Disproportionate Cell-Type Representation-Reference-Cited by-同舟云学术

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SCOTv2: Single-Cell Multiomic Alignment with Disproportionate Cell-Type Representation

Published:2022-11-01 Issue:11 Volume:29 Page:1213-1228
ISSN:1557-8666
Container-title:Journal of Computational Biology
language:en
Short-container-title:Journal of Computational Biology

Author:

Demetci Pinar¹²^ORCID,Santorella Rebecca³,Chakravarthy Manav²,Sandstede Bjorn³,Singh Ritambhara¹²^ORCID

Affiliation:

1. Center for Computational Molecular Biology, Brown University, Providence, Rhode Island, USA.

2. Department of Computer Science, Brown University, Providence, Rhode Island, USA.

3. Division of Applied Mathematics, Brown University, Providence, Rhode Island, USA.

Publisher

Mary Ann Liebert Inc

Subject

Computational Theory and Mathematics,Computational Mathematics,Genetics,Molecular Biology,Modeling and Simulation

Link

https://www.liebertpub.com/doi/pdf/10.1089/cmb.2022.0270

Reference20 articles.

1. Multi-omics profiling of mouse gastrulation at single-cell resolution

2. Single-cell landscape of nuclear configuration and gene expression during stem cell differentiation and X inactivation

3. Unsupervised topological alignment for single-cell multi-omics integration

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1. Scalable integration of multiomic single-cell data using generative adversarial networks;Bioinformatics;2024-05-01

2. On the Existence of Monge Maps for the Gromov–Wasserstein Problem;Foundations of Computational Mathematics;2024-02-15

3. UFGOT: Unbalanced Filter Graph Alignment with Optimal Transport for Cancer Subtyping Based on Multi-omics Data;Lecture Notes in Computer Science;2024

4. Scalable Integration of Multiomic Single Cell Data Using Generative Adversarial Networks;2023-06-29

5. Molecular mechanisms reconstruction from single-cell multi-omics data with HuMMuS;2023-06-09

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