Challenges in large-scale bioinformatics projects

Author:

Morrison-Smith SarahORCID,Boucher Christina,Sarcevic Aleksandra,Noyes Noelle,O’Brien Catherine,Cuadros Nazaret,Ruiz Jaime

Abstract

AbstractBiological and biomedical research is increasingly conducted in large, interdisciplinary collaborations to address problems with significant societal impact, such as reducing antibiotic resistance, identifying disease sub-types, and identifying genes that control for drought tolerance in plants. Many of these projects are data driven and involve the collection and analysis of biological data at a large-scale. As a result, life-science projects, which are frequently diverse, large and geographically dispersed, have created unique challenges for collaboration and training. We examine the communication and collaboration challenges in multidisciplinary research through an interview study with 20 life-science researchers. Our results show that both the inclusion of multiple disciplines and differences in work culture influence collaboration in life science. Using these results, we discuss opportunities and implications for designing solutions to better support collaborative tasks and workflows of life scientists. In particular, we show that life science research is increasingly conducted in large, multi-institutional collaborations, and these large groups rely on “mutual respect” and collaboration. However, we found that the interdisciplinary nature of these projects cause technical language barriers and differences in methodology affect trust. We use these findings to guide our recommendations for technology to support life science. We also present recommendations for life science research training programs and note the necessity for incorporating training in project management, multiple language, and discipline culture.

Publisher

Springer Science and Business Media LLC

Subject

General Economics, Econometrics and Finance,General Psychology,General Social Sciences,General Arts and Humanities,General Business, Management and Accounting

Reference73 articles.

1. Afgan E, Baker D, Batut B, vandenBeek M, Bouvier D, Čech M, Chilton J, Clements D, Coraor N, Grüning B, Guerler A, Hillman-Jackson J, Hiltemann S, Jalili V, Rasche H, Soranzo N, Goecks J, Taylor J, Nekrutenko A, Blankenberg D (2018) The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update. Nucleic Acids Res 46(W1 (may)):W537–W544. ISSN 0305-1048

2. Armenteras D (2021) Guidelines for healthy global scientific collaborations. Nat Ecol Evol. 5(9):1193–1194

3. Armstrong DJ, Cole P (2002) Managing distances and differences in geographically distributed work groups. In: Distributed work. The MIT Press, Cambridge, MA, USA. pp. 167–186

4. Attwood TK, Blackford S, Brazas MD, Davies A, Schneider MV (2017) A global perspective on evolving bioinformatics and data science training needs. Brief Bioinform 20(2 (August)):398–404. ISSN 1477-4054

5. Auerbach C, Silverstein LB (2003) Qualitative data: an introduction to coding and analysis, vol 21. NYU Press

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3