Metadata standards and practical guidelines for specimen and DNA curation when building barcode reference libraries for aquatic life

Author:

Rimet FrédéricORCID,Aylagas Eva,Borja ÁngelORCID,Bouchez AgnèsORCID,Canino Alexis,Chauvin Christian,Chonova Teofana,Ciampor Jr FedorORCID,Costa Filipe O.,Ferrari Benoit J. D.,Gastineau Romain,Goulon Chloé,Gugger Muriel,Holzmann Maria,Jahn Regine,Kahlert MariaORCID,Kusber Wolf-Henning,Laplace-Treyture Christophe,Leese FlorianORCID,Leliaert Frederik,Mann David G.,Marchand Frédéric,Méléder Vona,Pawlowski JanORCID,Rasconi Serena,Rivera Sinziana,Rougerie RodolpheORCID,Schweizer Magali,Trobajo Rosa,Vasselon ValentinORCID,Vivien Régis,Weigand AlexanderORCID,Witkowski Andrzej,Zimmermann Jonas,Ekrem TorbjørnORCID

Abstract

DNA barcoding and metabarcoding is increasingly used to effectively and precisely assess and monitor biodiversity in aquatic ecosystems. As these methods rely on data availability and quality of barcode reference libraries, it is important to develop and follow best practices to ensure optimal quality and traceability of the metadata associated with the reference barcodes used for identification. Sufficient metadata, as well as vouchers, corresponding to each reference barcode must be available to ensure reliable barcode library curation and, thereby, provide trustworthy baselines for downstream molecular species identification. This document (1) specifies the data and metadata required to ensure the relevance, the accessibility and traceability of DNA barcodes and (2) specifies the recommendations for DNA harvesting and for the storage of both voucher specimens/samples and barcode data.

Publisher

Pensoft Publishers

Subject

Nature and Landscape Conservation,Genetics,Animal Science and Zoology,Molecular Biology

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