Complete Genome Sequence of Avian Pathogenic Escherichia coli Strain APEC O2-211-Reference-Cited by-同舟云学术

Complete Genome Sequence of Avian Pathogenic Escherichia coli Strain APEC O2-211

Published:2018-09-27 Issue:12 Volume:7 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Nielsen Daniel W.¹,Mangiamele Paul²,Ricker Nicole³,Barbieri Nicolle L.⁴,Allen Heather K.³,Nolan Lisa K.⁵,Logue Catherine M.⁴

Affiliation:

1. Department of Veterinary Microbiology and Preventive Medicine, College of Veterinary Medicine, Iowa State University, Ames, Iowa, USA

2. Roche Sequencing Solutions, Belmont, California, USA

3. Food Safety and Enteric Pathogens Research Unit, National Animal Disease Center, ARS-USDA, Ames, Iowa, USA

4. Department of Population Health, College of Veterinary Medicine, University of Georgia, Athens, Georgia, USA

5. Department of Infectious Diseases, College of Veterinary Medicine, University of Georgia, Athens, Georgia, USA

Abstract

Avian pathogenic Escherichia coli (APEC) is the causative agent of colibacillosis, a disease that affects poultry production worldwide and leads to multimillion-dollar losses annually. Here, we report the genome sequence of APEC O2-211, a sequence type 117 (ST117) strain isolated from a diseased chicken.

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/MRA.01046-18

Reference10 articles.

1. Outer membrane protein patterns mark clones of Escherichia coli O2 and O78 strains that cause avian septicemia

2. The Impact of Media, Phylogenetic Classification, and E. coli Pathotypes on Biofilm Formation in Extraintestinal and Commensal E. coli From Humans and Animals

3. Comparative Analysis of Phylogenetic Assignment of Human and Avian ExPEC and Fecal Commensal Escherichia coli Using the (Previous and Revised) Clermont Phylogenetic Typing Methods and its Impact on Avian Pathogenic Escherichia coli (APEC) Classification

4. Trimmomatic: a flexible trimmer for Illumina sequence data

5. SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

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