Draft genomes of two phylotype I and II Ralstonia solanacearum species complex (RSSC) isolates causing bacterial wilt in tomato plants from Costa Rica

Author:

Galiano-Murillo Fiorella1ORCID,Salas-Lara Vidal1ORCID,Echandi Carlos23ORCID,Brenes-Guillén Laura1ORCID,Uribe-Lorío Lorena13ORCID

Affiliation:

1. Centro de Investigación en Biología Celular y Molecular, Universidad de Costa Rica, San José, Costa Rica

2. Estación Experimental Agrícola Fabio Baudrit Moreno, Universidad de Costa Rica, San José, Costa Rica

3. Escuela de Agronomía, Universidad de Costa Rica, San José, Costa Rica

Abstract

ABSTRACT Bacteria from RSSC hold agricultural significance as they are the causal agents of bacterial wilt. Here, we report the draft genomes of two bacteria extracted from vascular tissues of infected tomato plants. Isolate RALF-MA was classified as Ralstonia pseudosolanacearum (phylotype I) and RALSA-MA as Ralstonia solanacearum (phylotype II).

Funder

UCR | Vicerrectoría de Investigación, Universidad de Costa Rica

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Reference11 articles.

1. Elphinstone JG. 2005. The current bacterial wilt situation: a global view, p 9–28. In Allen C, Prior P, A. C. Hayward AC (ed), Bacterial wilt disease and the Ralstonia solanacearum species complex. APS Press, St Paul, MN.

2. Fegan M, Prior P. 2005. “How complex is the “Ralstonia solanacearum species complex”?, ”, p 449–461. In Allen C, Prior P, Hayward AC (ed), Bacterial wilt: the disease and the Ralstonia solanacearum species complex. APS Press, St Paul, MN.

3. Polyphasic taxonomic revision of the Ralstonia solanacearum species complex: proposal to emend the descriptions of Ralstonia solanacearum and Ralstonia syzygii and reclassify current R. syzygii strains as Ralstonia syzygii subsp. syzygii subsp. nov., R. solanacearum phylotype IV strains as Ralstonia syzygii subsp. indonesiensis subsp. nov., banana blood disease bacterium strains as Ralstonia syzygii subsp. celebesensis subsp. nov. and R. solanacearum phylotype I and III strains as Ralstonia pseudosolanacearum sp. nov.

4. Fontecha G. 2003. Análisis comparativo de las comunidades de procariotas intestinales de Rothschildia lebeau (Lepidoptera) mediante los polimorfismos en los fragmentos terminales de restricción (T-RFLP) del Gen ARNr 16S. Tesis de maestría, Universidad de Costa Rica, San José, Costa Rica.

5. Trimmomatic: a flexible trimmer for Illumina sequence data

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