High-Throughput Recovery and Characterization of Metagenome-Derived Glycoside Hydrolase-Containing Clones as a Resource for Biocatalyst Development

Author:

Armstrong Zachary1,Liu Feng2,Kheirandish Sam3,Chen Hong-Ming2,Mewis Keith1,Duo Tianmeng2,Morgan-Lang Connor4,Hallam Steven J.1356,Withers Stephen G.127

Affiliation:

1. Genome Science and Technology Program, University of British Columbia, Vancouver, British Columbia, Canada

2. Department of Chemistry, University of British Columbia, Vancouver, British Columbia, Canada

3. Department of Microbiology and Immunology, University of British Columbia, Vancouver, British Columbia, Canada

4. Graduate Program in Bioinformatics, University of British Columbia, Vancouver, British Columbia, Canada

5. ECOSCOPE Training Program, University of British Columbia, Vancouver, British Columbia, Canada

6. Peter Wall Institute for Advanced Studies, University of British Columbia, Vancouver, British Columbia, Canada

7. Department of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia, Canada

Abstract

The generation of new biocatalysts for plant biomass degradation and glycan synthesis has typically relied on the characterization and investigation of one or a few enzymes at a time. By coupling functional metagenomic screening and high-throughput functional characterization, we can progress beyond the current scale of catalyst discovery and provide rapid annotation of catalyst function. By functionally screening environmental DNA from many diverse sources, we have generated a suite of active glycoside hydrolase-containing clones and demonstrated their reaction parameters. We then demonstrated the utility of this collection through the generation of a new catalyst for the formation of azido-modified glycans. Further interrogation of this collection of clones will expand our biocatalytic toolbox, with potential application to biomass deconstruction and synthesis of glycans.

Funder

Genome British Columbia

Gouvernement du Canada | Natural Sciences and Engineering Research Council of Canada

Genome Canada

Publisher

American Society for Microbiology

Subject

Computer Science Applications,Genetics,Molecular Biology,Modelling and Simulation,Ecology, Evolution, Behavior and Systematics,Biochemistry,Physiology,Microbiology

Cited by 12 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

1. Metagenomic profiling of rhizosphere microbiota: Unraveling the plant-soil dynamics;Physiological and Molecular Plant Pathology;2024-09

2. Strategies for Automated Enzymatic Glycan Synthesis (AEGS);Biotechnology Advances;2023-10

3. Mining microbial resources from water;Resources, Conservation and Recycling;2023-04

4. Emerging enzyme surface display systems for waste resource recovery;Environmental Microbiology;2022-11-21

5. Functional metagenomic screening identifies an unexpected β-glucuronidase;Nature Chemical Biology;2022-07-07

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3