Nanopore Sequencing for Characterization of HIV-1 Recombinant Forms-Reference-Cited by-同舟云学术

Nanopore Sequencing for Characterization of HIV-1 Recombinant Forms

Published:2022-08-31 Issue:4 Volume:10 Page:
ISSN:2165-0497
Container-title:Microbiology Spectrum
language:en
Short-container-title:Microbiol Spectr

Author:

Mori Mikiko¹²,Ode Hirotaka¹,Kubota Mai¹,Nakata Yoshihiro¹²,Kasahara Takaaki¹²,Shigemi Urara¹,Okazaki Reiko¹,Matsuda Masakazu¹,Matsuoka Kazuhiro¹,Sugimoto Atsuko¹,Hachiya Atsuko¹,Imahashi Mayumi¹,Yokomaku Yoshiyuki¹,Iwatani Yasumasa¹²^ORCID

Affiliation:

1. Clinical Research Center, National Hospital Organization Nagoya Medical Center, Nagoya, Japan

2. Division of Basic Medicine, Nagoya University Graduate School of Medicine, Nagoya, Japan

Abstract

HIV-1 is characterized by large genetic differences, including HIV-1 recombinant forms (RFs). Conventional genetic analyses require time-consuming pretreatments, i.e., cloning or single-genome amplification, to distinguish RFs from dual- or multiple-infection cases.

Funder

MEXT | Japan Society for the Promotion of Science

Japan Agency for Medical Research and Development

Publisher

American Society for Microbiology

Subject

Infectious Diseases,Cell Biology,Microbiology (medical),Genetics,General Immunology and Microbiology,Ecology,Physiology

Link

https://journals.asm.org/doi/pdf/10.1128/spectrum.01507-22

Reference47 articles.

1. Frequency and implications of HIV superinfection

2. Extremely High Mutation Rate of HIV-1 In Vivo