Draft genome sequence of <i>Amycolatopsis camponoti</i> RTGN1, a bacterial endophyte isolated from <i>Alnus glutinosa</i> root nodules-Reference-Cited by-同舟云学术

Draft genome sequence of Amycolatopsis camponoti RTGN1, a bacterial endophyte isolated from Alnus glutinosa root nodules

Published:2024-01-17 Issue:1 Volume:13 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Thompson Ryan Michael¹^ORCID,Fox Edward M.²^ORCID,Montero-Calasanz Maria del Carmen¹³^ORCID

Affiliation:

1. School of Natural and Environmental Sciences, Newcastle University , Newcastle upon Tyne, United Kingdom

2. Department of Applied Sciences, Northumbria University , Newcastle upon Tyne, United Kingdom

3. IFAPA Las Torres-Andalusian Institute of Agricultural and Fisheries Research and Training, Junta de Andalucía, Cra. Sevilla-Cazalla , Seville, Spain

Abstract

ABSTRACT Here, we report the draft genome sequence of Amycolatopsis camponoti RTGN1, a bacterial endophyte of Alnus glutinosa root nodules, collected from Saltwell Park, United Kingdom. The genome is 11.9 Mbp in size, composed of 147 contigs, with an N 50 of 179,211 bp and presenting a GC content of 70.9%.

Funder

UKRI | Natural Environment Research Council

Spanish Ministry of Economic, Industry and Competitiveness

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/mra.00470-23

Reference12 articles.

1. Phytoremediation: Metal decontamination of soils after the sequential forestation of former opencast coal land

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3. Metal uptake by young trees from dredged brackish sediment: limitations and possibilities for phytoextraction and phytostabilisation

4. Isolation and characterization of non-Frankia actinobacteria from root nodules of Alnus glutinosa, Casuarina glauca and Elaeagnus angustifolia

5. Isolation of Frankia Strains from Alder Actinorhizal Root Nodules