Phosphorylation of CFP10 modulates Mycobacterium tuberculosis virulence

Author:

Malakar Basanti1ORCID,Chauhan Komal2,Sanyal Priyadarshini3,Naz Saba1,Kalam Haroon2,Vivek-Ananth R. P.4,Singh Lakshya Veer2,Samal Areejit4,Kumar Dhiraj2ORCID,Nandicoori Vinay Kumar13ORCID

Affiliation:

1. National Institute of Immunology, Aruna Asaf Ali Marg , New Delhi, India

2. International Centre for Genetic Engineering and Biotechnology, Aruna Asaf Ali Marg , New Delhi, India

3. Academy of Scientific and Innovative Research (AcSIR), CSIR-Centre for Cellular and Molecular Biology Campus , Hyderabad, India

4. The Institute of Mathematical Sciences (IMSc), Homi Bhabha National Institute (HBNI) , Chennai, India

Abstract

ABSTRACT Virulence effectors secreted by Mycobacterium tuberculosis ( Mtb ) help subvert host immune mechanisms and, therefore, are critical for establishing infection and pathogenesis. However, knowledge in terms of signaling mechanisms that modulate the secretion of virulence factors is sparse. We performed high-throughput secretome, phosphoproteome, and phospho-secretome analysis of Mtb . We combined the analysis with empirical validations to show regulation of mycobacterial secretion through protein phosphorylation. System level protein-protein interaction network analysis superimposed with the secretome, phosphoproteome, and phospho-secretome profile revealed an intricate relationship between phosphorylation and secretion. At the core of the network was a key virulence factor CFP10. We identified PknA to be the kinase responsible for phosphorylating CFP10. Using genetic tools, we show that phosphomimetic mutation of CFP10 negatively regulates the secretion of virulence mediator ESAT6. Significantly, the dynamics of CFP10 phosphorylation strongly influenced bacterial virulence and survival within macrophages and mice. Together, the results show that the dynamic phosphorylation status of the secretory protein CFP10 regulates the secretion of virulence factors and impacts virulence. IMPORTANCE Secreted virulence factors play a critical role in bacterial pathogenesis. Virulence effectors not only help bacteria to overcome the host immune system but also aid in establishing infection. Mtb , which causes tuberculosis in humans, encodes various virulence effectors. Triggers that modulate the secretion of virulence effectors in Mtb are yet to be fully understood. To gain mechanistic insight into the secretion of virulence effectors, we performed high-throughput proteomic studies. With the help of system-level protein-protein interaction network analysis and empirical validations, we unravelled a link between phosphorylation and secretion. Taking the example of the well-known virulence factor of CFP10, we show that the dynamics of CFP10 phosphorylation strongly influenced bacterial virulence and survival ex vivo and in vivo . This study presents the role of phosphorylation in modulating the secretion of virulence factors.

Funder

Department of Biotechnology, Ministry of Science and Technology, India

The Wellcome Trust DBT India Alliance

Publisher

American Society for Microbiology

Subject

Virology,Microbiology

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