Baseline Sequencing Surveillance of Public Clinical Testing, Hospitals, and Community Wastewater Reveals Rapid Emergence of SARS-CoV-2 Omicron Variant of Concern in Arizona, USA-Reference-Cited by-同舟云学术

Baseline Sequencing Surveillance of Public Clinical Testing, Hospitals, and Community Wastewater Reveals Rapid Emergence of SARS-CoV-2 Omicron Variant of Concern in Arizona, USA

Published:2023-02-28 Issue:1 Volume:14 Page:
ISSN:2150-7511
Container-title:mBio
language:en
Short-container-title:mBio

Author:

Smith Matthew F.¹,Holland Steven C.¹,Lee Mihyun B.¹,Hu James C.¹,Pham Nghia C.¹,Sullins Regan A.¹,Holland LaRinda A.¹,Mu Tianchen¹,Thomas Alexis W.²,Fitch Remington²,Driver Erin M.³,Halden Rolf U.³,Villegas-Gold Michelle⁴,Sanders Sheri⁵,Krauss Jennifer L.⁶,Nordstrom Lora⁷,Mulrow Mary⁷,White Michael⁷,Murugan Vel²,Lim Efrem S.¹⁸^ORCID

Affiliation:

1. Center for Fundamental and Applied Microbiomics, Biodesign Institute, Arizona State University, Tempe, Arizona, USA

2. Center for Personalized Diagnostics, Biodesign Institute, Arizona State University, Tempe, Arizona, USA

3. Center for Environmental Health Engineering, Biodesign Institute, Arizona State University, Tempe, Arizona, USA

4. Knowledge Enterprise, Arizona State University, Tempe, Arizona, USA

5. Dignity Health, St. Joseph's Hospital and Medical Center, Phoenix, Arizona, USA

6. Division of Pathology and Laboratory Medicine, Phoenix Children's Hospital, Phoenix, Arizona, USA

7. Valleywise Health Medical Center, Phoenix, Arizona, USA

8. School of Life Sciences, Arizona State University, Tempe, Arizona, USA

Abstract

SARS-CoV-2 continues to evolve new variants throughout the pandemic. However, the temporal dynamics of how SARS-CoV-2 variants emerge to become the dominant circulating variant is not precisely known.

Funder

Tohono O'Odham Nation

Arizona Department of Health Services

HHS | Centers for Disease Control and Prevention

Publisher

American Society for Microbiology

Subject

Virology,Microbiology

Link

https://journals.asm.org/doi/pdf/10.1128/mbio.03101-22

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