Complete genome sequence of <i>Bordetella parapertussis</i> strain 400431-b, isolated from a protracted course of whooping cough in Austria, 2023-Reference-Cited by-同舟云学术

Complete genome sequence of Bordetella parapertussis strain 400431-b, isolated from a protracted course of whooping cough in Austria, 2023

Published:2024-01-17 Issue:1 Volume:13 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Cardoso Maria João¹²^ORCID,Rouhani David³,Cabal Rosel Adriana¹,Daza Prieto Beatriz¹⁴,Hopfgartner Miriam¹,Stöger Anna¹,Hasenberger Petra¹,Stadlbauer Silke¹,Moesenbacher Tobias¹,Hyden Patrick¹,Wiedermann Ursula⁵,Schmid Daniela⁶,Ruppitsch Werner¹⁷^ORCID

Affiliation:

1. Institute of Medical Microbiology and Hygiene, Austrian Agency for Health and Food Safety , Vienna, Austria

2. ECDC Fellowship Programme, Public Health Microbiology path (EUPHEM), European Centre for Disease Prevention and Control (ECDC) , Stockholm, Sweden

3. St. Anna Children’s Hospital , Vienna, Austria

4. Institute of Chemical, Environmental, and Bioscience Engineering, Research Area of Biochemical Technology, Technical University of Vienna , Vienna, Austria

5. Institute of Specific Prophylaxis and Tropical Medicine, Center for Pathophysiology, Infectiology and Immunology, Medical University of Vienna , Vienna, Austria

6. Division of Infection Diagnosis and Infectious Disease Epidemiology, Center of Pathophysiology, Infectiology and Immunology, Medical University of Vienna , Vienna, Austria

7. Department of Biotechnology, University of Natural Resources and Life Sciences , Vienna, Austria

Abstract

ABSTRACT Here, we report the complete genome of Bordetella parapertussis strain 400431-b isolated from a nasopharyngeal swab from a 4-year-old patient presenting with a protracted course of whooping cough, vaccinated with three doses of diphtheria-tetanus-acellular pertussis-hepatitis B-poliomyelitis- Haemophilus influenzae type b vaccine.

Funder

European Public Health Microbiology Training Program (EUPHEM), European Centre for Disease Prevention and Control

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/mra.00976-23

Reference15 articles.

1. Bordetella parapertussis Bacteremia: Clinical Expression and Bacterial Genomics

2. Genome Sequences of Lactococcus garvieae and Lactococcus petauri Strains Isolated from Traditional Montenegrin Brine Cheeses

3. Andrews S . 2010. FastQC: a quality control tool for high throughput sequence data. Available from: http://www.bioinformatics.babraham.ac.uk/projects/fastqc

4. Performance of neural network basecalling tools for Oxford Nanopore sequencing

5. Assembly of long, error-prone reads using repeat graphs