Affiliation:
1. Plant Protection Department, Faculty of Agriculture, University of Kufa, Najaf, Iraq
Abstract
Here, we report the coding-complete sequence of Cowpea mild mottle virus (CPMMV; strain Hilla) in cowpea using total transcriptome sequencing (RNA-seq) and bioinformatics analyses. The sequence length was 8,119 bp long and has 6 open reading frames. The genome was phylogenetically close to two isolates collected from Ghana.
Publisher
American Society for Microbiology
Subject
Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology
Reference6 articles.
1. Cowpea mild mottle virus (Carlavirus, Betaflexiviridae): a review
2. Synonymous Codon Pattern of Cowpea Mild Mottle Virus Sheds Light on Its Host Adaptation and Genome Evolution
3. Sadeq Al-Kuwaiti NA. 2013. Molecular characterization of viruses infecting potato and vegetables in Iraq. Doctoral dissertation, University of Greenwich, London, England.
4. Evaluation of disease incidence and severity and yield loss of finger millet varieties and mycelial growth inhibition of Pyricularia grisea isolates using biological antagonists and fungicides in vitro condition;Gashaw G;J Appl Biosci,2014
5. Trimmomatic: a flexible trimmer for Illumina sequence data