Crystal Structure of African Swine Fever Virus pS273R Protease and Implications for Inhibitor Design

Author:

Li Guobang12,Liu Xiaoxia123,Yang Mengyuan12,Zhang Guangshun12,Wang Zhengyang123,Guo Kun123,Gao Yuxue12,Jiao Peng123,Sun Jixue1,Chen Cheng4,Wang Hao12,Deng Weilong12,Xiao Huihe1,Li Sizheng1,Wu Haoru12,Wang Ying5,Cao Lin126,Jia Zihan67,Shang Luqing12,Yang Cheng123,Guo Yu1238ORCID,Rao Zihe12368

Affiliation:

1. State Key Laboratory of Medicinal Chemical Biology and College of Pharmacy, Nankai University, Tianjin, People’s Republic of China

2. Drug Discovery Center for Infectious Diseases, Nankai University, Tianjin, People’s Republic of China

3. Tianjin International Joint Academy of Biotechnology and Medicine, Tianjin, People’s Republic of China

4. School of Life Sciences, Tianjin University, Tianjin, People’s Republic of China

5. Tianjin Crops Research Institute, Tianjin Academy of Agricultural Sciences, Tianjin, People’s Republic of China

6. College of Life Science, Nankai University, Tianjin, People’s Republic of China

7. School of Traditional Chinese Medicine, Tianjin University of Traditional Chinese Medicine, Tianjin, People’s Republic of China

8. Frontiers Science Center for Cell Responses, Nankai University, Tianjin, People’s Republic of China

Abstract

African swine fever virus, a large and complex icosahedral DNA virus, causes a deadly infection in domestic pigs. In addition to Africa and Europe, countries in Asia, including China, Vietnam, and Mongolia, were negatively affected by the hazards posed by ASFV outbreaks in 2018 and 2019, at which time more than 30 million pigs were culled. Until now, there has been no vaccine for protection against ASFV infection or effective treatments to cure ASF. Here, we solved the high-resolution crystal structure of the ASFV pS273R protease. The pS273R protease has a two-domain structure that distinguishes it from other members of the SUMO protease family, while the unique “arm domain” has been proven to be essential for its hydrolytic activity. Moreover, the peptidomimetic aldehyde compounds designed to target the substrate binding pocket exert prominent inhibitory effects and can thus be used in a potential lead for anti-ASFV drug development.

Funder

National Key Research and Development Program of China

National Key Research and Development Program

Young Elite Sponsership Program by CAST

National Natural Science Foundation of China

NSF | International Cooperation and Exchange Programme

Publisher

American Society for Microbiology

Subject

Virology,Insect Science,Immunology,Microbiology

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