First Insights into the Genome Sequence of the Alkaliphilic Thermotolerant Bacterium Clostridium thermoalcaliphilum JW/YL23-2 T-Reference-Cited by-同舟云学术

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First Insights into the Genome Sequence of the Alkaliphilic Thermotolerant Bacterium Clostridium thermoalcaliphilum JW/YL23-2 T

Published:2017-05-18 Issue:20 Volume:5 Page:
ISSN:2169-8287
Container-title:Genome Announcements
language:en
Short-container-title:Genome Announc

Author:

Poehlein Anja¹^ORCID,Berg Alexandra²,Welsing Gina²,Daniel Rolf¹^ORCID

Affiliation:

1. Genomic and Applied Microbiology & Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, Georg-August University of Göttingen, Göttingen, Germany

2. Members of the Applied Bioinformatics in Microbiology Course of the Microbiology and Biochemistry M.Sc./Ph.D. program, Georg-August University of Göttingen, Göttingen, Germany

Abstract

ABSTRACT Clostridium thermoalcaliphilum is an obligate anaerobic and rod-shaped bacterium isolated from sewage sludge. It is an alkaliphilic thermotolerant organism and utilizes sucrose, glucose, fructose, maltose, cellobiose, amino acids, and Casamino Acids as substrates. The draft genome comprises 2.031 Mbp and 2,027 predicted protein-coding genes.

Publisher

American Society for Microbiology

Subject

Genetics,Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/genomeA.00368-17

Reference12 articles.

1. Clostridium thermoalcaliphilum sp. nov., an Anaerobic and Thermotolerant Facultative Alkaliphile

2. Trimmomatic: a flexible trimmer for Illumina sequence data

3. SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

4. Qualimap: evaluating next-generation sequencing alignment data

5. Prokka: rapid prokaryotic genome annotation

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