Complete genome sequence of <i>Sphingomonas</i> sp. strain R1, a bacterium isolated from tomato ( <i>Solanum lycopersicum</i> )-Reference-Cited by-同舟云学术

Complete genome sequence of Sphingomonas sp. strain R1, a bacterium isolated from tomato ( Solanum lycopersicum )

Published:2024-07-18 Issue:7 Volume:13 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Yen Hsi-Ching¹^ORCID,Wang Si-Chong¹^ORCID,Chen Wen-Ming²,Lai Erh-Min¹^ORCID,Kuo Chih-Horng¹^ORCID

Affiliation:

1. Institute of Plant and Microbial Biology, Academia Sinica, Taipei, Taiwan

2. Laboratory of Microbiology, Department of Seafood Science, National Kaohsiung University of Science and Technology, Kaohsiung, Taiwan

Abstract

ABSTRACT Sphingomonas sp. strain R1 was isolated from the stem of a tomato plant and exhibited antagonism with Agrobacterium . The complete genome sequence of this bacterium consists of one 3,874,532 bp circular chromosome and two plasmids.

Funder

Academia Sinica

National Science and Technology Council

Publisher

American Society for Microbiology

Link

https://journals.asm.org/doi/pdf/10.1128/mra.00242-24

Reference11 articles.

1. Sphingomonas spermidinifaciens sp. nov., a novel bacterium containing spermidine as the major polyamine, isolated from an abandoned lead–zinc mine and emended descriptions of the genus Sphingomonas and the species Sphingomonas yantingensis and Sphingomonas japonica

2. Soil Inoculation and Blocker-Mediated Sequencing Show Effects of the Antibacterial T6SS on Agrobacterial Tumorigenesis and Gallobiome

3. Complete genome sequence of Agrobacterium pusense Bbcg2-2, a strain isolated from blueberry crown gall in Taiwan

4. Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads

5. Fast and accurate short read alignment with Burrows-Wheeler transform