Rapid Detection and Estimation by Pyrosequencing of 23S rRNA Genes with a Single Nucleotide Polymorphism Conferring Linezolid Resistance in Enterococci

Author:

Sinclair Alistair1,Arnold Catherine2,Woodford Neil1

Affiliation:

1. Antibiotic Resistance Monitoring and Reference Laboratory

2. Genomics, Proteomics and Bioinformatics Unit, Specialist and Reference Microbiology Division, Health Protection Agency—Colindale, London NW9 5HT, United Kingdom

Abstract

ABSTRACT Pyrosequencing was used to detect rapidly and estimate the number of 23S rRNA genes with a G2576T mutation in 43 linezolid-resistant and -susceptible clinical isolates of enterococci. The method showed 100% concordance with PCR-restriction fragment length polymorphism for detecting isolates homozygous for either G2576 or T2576 or heterozygous for this mutation. A good correlation was found between linezolid MICs and the number of 23S rRNA gene copies carrying the mutation.

Publisher

American Society for Microbiology

Subject

Infectious Diseases,Pharmacology (medical),Pharmacology

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