Clinical and Molecular Description of a High-Copy IncQ1 KPC-2 Plasmid Harbored by the International ST15 Klebsiella pneumoniae Clone

Author:

Martins Willames M. B. S.12ORCID,Nicolas Marisa F.3,Yu Yang14ORCID,Li Mei1,Dantas Priscila5,Sands Kirsty1,Portal Edward1,Almeida Luiz G. P.3,Vasconcelos Ana Tereza R.3,Medeiros Eduardo A.5,Toleman Mark A.1,Walsh Timothy R.1,Gales Ana C.2,Andrey Diego O.16ORCID

Affiliation:

1. Department of Medical Microbiology, Division of Infection and Immunity, Cardiff University, Cardiff, United Kingdom

2. Universidade Federal de São Paulo - UNIFESP, Laboratório Alerta, Division of Infectious Diseases, Department of Internal Medicine, Escola Paulista de Medicina - EPM, São Paulo, São Paulo, Brazil

3. National Laboratory for Scientific Computing - LNCC, Petrópolis, Rio de Janeiro, Brazil

4. National Risk Assessment Laboratory for Antimicrobial Resistance of Animal Original Bacteria, South China Agricultural University, Guangzhou, China

5. Universidade Federal de São Paulo - UNIFESP, Hospital Epidemiology Committee, Hospital São Paulo, Division of Infectious Diseases, Department of Internal Medicine, Escola Paulista de Medicina - EPM, São Paulo, Brazil

6. Service of Infectious Diseases, Geneva University Hospitals and Faculty of Medicine, Geneva, Switzerland

Abstract

In many parts of the world, carbapenem resistance is a serious public health concern. In Brazil, carbapenem resistance in Enterobacterales is mostly driven by the dissemination of KPC-2-producing K. pneumoniae clones. Despite being endemic in this country, only a few reports providing both clinical and genomic data are available in Brazil, which limit the understanding of the real clinical impact caused by the dissemination of different clones carrying bla KPC-2 in Brazilian hospitals. Although several of these KPC-2-producer K. pneumoniae isolates belong to the clonal complex 258 and carry Tn 4401 transposons located on large plasmids, a concomitant emergence and silent dissemination of small high-copy-number bla KPC-2 plasmids are of importance, as described in this study. Our data identify a small high-copy-number IncQ1 KPC plasmid, its clinical relevance, and the potential for conjugative transfer into several K. pneumoniae isolates, belonging to different international lineages, such as ST258, ST101, and ST15.

Publisher

American Society for Microbiology

Subject

Molecular Biology,Microbiology

Reference48 articles.

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2. Clinical epidemiology of the global expansion of Klebsiella pneumoniae carbapenemases

3. Public Health England. 2020. Klebsiella spp. bacteraemia: voluntary surveillance. Health Protection Report 14(1). https://www.gov.uk/government/publications/klebsiella-spp-bacteraemia-voluntary-surveillance.

4. ANVISA Brazilian Agencia Nacional de Vigilancia Sanitaria. 2017. Boletim de segurança do paciente e qualidade em serviços de saúde no. 17: avaliação dos indicadores nacionals das infecções relacionadas à assistência à saúde (IRAS) e resistência microbiana do ano de 2017. https://app.powerbi.com/view?r=eyJrIjoiZTFiOGRhOTYtYzZjOS00NmZmLWE5MWUtN2RkNDhiZGJiOGE1IiwidCI6ImI2N2FmMjNmLWMzZjMtNGQzNS04MGM3LWI3MDg1ZjVlZGQ4MSJ9. Accessed 10 April 2020.

5. Dissemination ofblaKPC-2by the Spread of Klebsiella pneumoniae Clonal Complex 258 Clones (ST258, ST11, ST437) and Plasmids (IncFII, IncN, IncL/M) among Enterobacteriaceae Species in Brazil

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