Complete Genome Sequence of the Soil-Isolated Psychrobacillus sp. Strain AK 1817, Capable of Biotransforming the Ergostane Triterpenoid Antcin K-Reference-Cited by-同舟云学术

Complete Genome Sequence of the Soil-Isolated Psychrobacillus sp. Strain AK 1817, Capable of Biotransforming the Ergostane Triterpenoid Antcin K

Published:2021-10-07 Issue:40 Volume:10 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Gómez-Luciano Luis B.¹,Wu Yu-Wei²,Chiang Chien-Min³,Chang Te-Sheng⁴,Wu Jiumn-Yih⁵,Wang Tzi-Yuan⁶^ORCID

Affiliation:

1. Office of the VP for Research and Graduate Studies, Universidad Católica del Cibao, La Vega, Dominican Republic

2. Graduate Institute of Biomedical Informatics, College of Medical Science and Technology, Taipei Medical University, Taipei, Taiwan

3. Department of Biotechnology, Chia Nan University of Pharmacy and Science, Jen-Te District, Tainan, Taiwan

4. Department of Biological Sciences and Technology, National University of Tainan, Tainan, Taiwan

5. Department of Food Science, National Quemoy University, Jin-Ning Township, Kinmen County, Taiwan

6. Biodiversity Research Center, Academia Sinica, Taipei, Taiwan

Abstract

The soil bacterium Psychrobacillus sp. strain AK 1817 was isolated from a tropical soil sample collected in Taiwan. Strain AK 1817 biotransforms the ergostane triterpenoid antcin K from the fungus Antrodia cinnamomea . The genome was sequenced using the PacBio RS II platform and consists of one chromosome of 4,096,020 bp, comprising 3,907 protein-coding genes, 75 tRNAs, 30 rRNAs, 5 noncoding RNAs (ncRNAs), and 100 pseudogenes.

Funder

Ministry of Science and Technology, Taiwan

Academia Sinica, Taiwan

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/MRA.01242-20

Reference4 articles.

1. Biotransformation of Ergostane Triterpenoid Antcin K from Antrodia cinnamomea by Soil-Isolated Psychrobacillus sp. AK 1817

2. Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation

3. NCBI prokaryotic genome annotation pipeline

4. ezTree: an automated pipeline for identifying phylogenetic marker genes and inferring evolutionary relationships among uncultivated prokaryotic draft genomes