Carbapenem-Resistant Citrobacter freundii and Escherichia coli Harboring a Common IncC-Type Plasmid Encoding IS 26 Upstream of bla NDM-1, sul1 , aph(3′)-VI , and qacE Isolated from Edible Mastacembelidae Fish-Reference-Cited by-同舟云学术

Carbapenem-Resistant Citrobacter freundii and Escherichia coli Harboring a Common IncC-Type Plasmid Encoding IS 26 Upstream of bla _NDM-1, sul1 , aph(3′)-VI , and qacE Isolated from Edible Mastacembelidae Fish

Published:2023-05-17 Issue:5 Volume:12 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Nakayama Tatsuya¹^ORCID,Yamaguchi Takahiro²^ORCID,Minh Doan Tran Nguyen³,Hoang Oanh Nguyen³,Thi Hien Le³,Thanh Phong Ngo³,Hoai Phuong Hoang³,Jinnai Michio⁴,Do Phuc Nguyen³,Van Chinh Dang³,Kumeda Yuko⁵,Hase Atsushi⁶

Affiliation:

1. Graduate School of Integrated Sciences for Life, Hiroshima University, Hiroshima, Japan

2. Division of Microbiology, Osaka Institute of Public Health, Osaka City, Osaka, Japan

3. Division of Food Microbiology, Institute of Public Health, Ho Chi Minh City, Vietnam

4. Kanagawa Institute of Public Health, Chigasaki City, Kanagawa, Japan

5. Research Center for Microorganism Control, Osaka Prefecture University, Sakai City, Osaka, Japan

6. Faculty of Contemporary Human Life Science, Tezukayama University, Nara City, Nara, Japan

Abstract

Carbapenem-resistant Citrobacter freundii CF20-4P-1 and Escherichia coli EC20-4B-2 were isolated from edible Mastacembelidae in Vietnam. We present the draft genome sequences, and the complete plasmid genome sequencing was also performed by hybrid assembly sequencing of Oxford Nanopore and Illumina. The 137-kbp plasmid encoding the assembled bla NDM-1 was detected in both strains.

Funder

Ministry of Education, Culture, Sports, Science and Technology

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/mra.01344-22

Reference6 articles.

1. Wide Spread of Plasmid-Mediated Antibiotic Resistant Bacteria in Imported Fishery Products

2. Isolation of carbapenem-resistant Enterobacteriaceae harbouring NDM-1, 4, 5, OXA48 and KPC from river fish in Vietnam

3. Characteristics of Extended-Spectrum β-Lactamase–ProducingEscherichia coliin Retail Meats and Shrimp at a Local Market in Vietnam

4. fastp: an ultra-fast all-in-one FASTQ preprocessor

5. NanoPack: visualizing and processing long-read sequencing data

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