Genome sequence of white spot syndrome virus (WSSV) infecting cultured black tiger shrimp ( <i>Penaeus monodon</i> ) in Bangladesh-Reference-Cited by-同舟云学术

Genome sequence of white spot syndrome virus (WSSV) infecting cultured black tiger shrimp ( Penaeus monodon ) in Bangladesh

Published:2024-04-11 Issue:4 Volume:13 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Islam S. M. Rafiqul¹²^ORCID,Ahmed Robel¹²,Sharmen Farjana¹²^ORCID,Hossain Md. Mobarok³^ORCID,Chakma Kallyan¹²^ORCID,Tanni Afroza Akter¹²^ORCID,Akash Md. Ashikur Alim¹²,Hossain Mohammad Enayet³^ORCID,Chowdhury M. Shah Nawaz⁴^ORCID,Siddiki AMAM Zonaed⁵^ORCID,Hossain Anwar⁶^ORCID,Mandal Shankar C.⁶,Crandall Keith A.⁷^ORCID,Rahnavard Ali⁷^ORCID,Sharifuzzaman SM⁴^ORCID,Mannan Adnan¹²^ORCID

Affiliation:

1. Department of Genetic Engineering and Biotechnology, University of Chittagong, Chattogram, Bangladesh

2. Next-generation Sequencing, Research and Innovation Laboratory Chittagong (NRICh), Biotechnology Research and Innovation Centre (BRIC), University of Chittagong, Chattogram, Bangladesh

3. International Centre for Diarrhoeal Disease Research, Bangladesh (ICDDR,B), Dhaka, Bangladesh

4. Institute of Marine Sciences, University of Chittagong, Chattogram, Bangladesh

5. Department of Pathology and Parasitology, Genomics Research Group, Chattogram Veterinary and Animal Sciences University, Chattogram, Bangladesh

6. Department of Fisheries, Aquaculture Genomics Laboratory, University of Dhaka, Dhaka, Bangladesh

7. Department of Biostatistics and Bioinformatics, Computational Biology Institute, Milken Institute School of Public Health, George Washington University, Washington, District of Columbia, USA

Abstract

ABSTRACT The white spot syndrome virus (WSSV) is a causative agent of white spot disease (WSD) in crustaceans, especially in cultivated black tiger shrimp ( Penaeus monodon ), leading to significant economic losses in the aquaculture sector. The present study describes four whole genome sequences of WSSV obtained from coastal regions of Bangladesh.

Funder

Chittagong University Research and Publication Cell

Ministry of Science and Technology, Bangladesh

Publisher

American Society for Microbiology

Link

https://journals.asm.org/doi/pdf/10.1128/mra.01211-23

Reference18 articles.

1. Comparative study of the reproductive performance and White Spot Syndrome Virus (WSSV) status of black tiger shrimp (Penaeus monodon) collected from the Bay of Bengal

2. Circulatory white spot syndrome virus in South-West region of Bangladesh from 2014 to 2017: molecular characterization and genetic variation

3. Prevalence and distribution of W hite S pot S yndrome V irus in cultured shrimp

4. Trimmomatic: a flexible trimmer for Illumina sequence data

5. Falco: high-speed FastQC emulation for quality control of sequencing data