Machine Learning and Artificial Intelligence in Drug Repurposing—Challenges and Perspectives

Author:

Anokian Ezequiel1ORCID,Bernett Judith2ORCID,Freeman Adrian3ORCID,List Markus2ORCID,Santamaría Lucía Prieto45ORCID,Tanoli Ziaurrehman67ORCID,Bonnin Sarah1ORCID

Affiliation:

1. Discovery and Translational Science (DTS), Clarivate Analytics, Barcelona, Spain

2. Data Science in Systems Biology, School of Life Sciences, Technical University of Munich, Freising, Germany

3. Discovery Sciences, Research and Early Development, BioPharmaceuticals R&D, AstraZeneca, Cambridge, UK

4. Escuela Técnica Superior de Ingenieros Informáticos, Universidad Politécnica de Madrid, Boadilla del Monte, Spain

5. Centro de Tecnología Biomédica, Universidad Politécnica de Madrid, Pozuelo de Alarcón, Spain

6. Institute for Molecular Medicine Finland (FIMM), HiLIFE, University of Helsinki, Helsinki, Finland

7. BioICAWtech, Helsinki, Finland

Abstract

Artificial intelligence (AI) and machine learning (ML) techniques play an increasingly crucial role in the field of drug repurposing. As the number of computational tools grows, it is essential to not only understand and carefully select the method itself, but also consider the input data used for building predictive models. This review aims to take a dive into current computational methods that leverage AI and ML to drive and accelerate compound and drug target selection, in addition to addressing the existing challenges and providing perspectives. While there is no doubt that AI- and ML-based tools are transforming traditional approaches, especially with recent advancements in graph-based methods, they present novel challenges that require the human eye and expert intervention. The growing complexity of OMICs data further emphasizes the importance of data standardization and quality.

Publisher

ScienceOpen

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