Manipulating Wild and Tamed Phytobiomes: Challenges and Opportunities

Author:

Bell Terrence H.123ORCID,Hockett Kevin L.123,Alcalá-Briseño Ricardo I.456,Barbercheck Mary78,Beattie Gwyn A.9,Bruns Mary Ann2310ORCID,Carlson John E.310,Chung Taejung311,Collins Alyssa1,Emmett Bryan12,Esker Paul18,Garrett Karen A.456,Glenna Leland3813,Gugino Beth K.1,Jiménez-Gasco María del Mar18ORCID,Kinkel Linda14ORCID,Kovac Jasna311,Kowalski Kurt P.15,Kuldau Gretchen18,Leveau Johan H. J.16,Michalska-Smith Matthew J.1417,Myrick Jessica18,Peter Kari1,Salazar Maria Fernanda Vivanco813,Shade Ashley19202122,Stopnisek Nejc192021,Tan Xiaoqing311,Welty Amy T.9,Wickings Kyle23,Yergeau Etienne24

Affiliation:

1. Department of Plant Pathology and Environmental Microbiology, The Pennsylvania State University, University Park, PA, U.S.A.

2. Intercollege Graduate Degree Program in Ecology, The Pennsylvania State University, University Park, U.S.A.

3. Microbiome Center, The Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA, U.S.A.

4. Plant Pathology Department, University of Florida, Gainesville, FL, U.S.A.

5. Institute for Sustainable Food Systems, University of Florida, Gainesville, FL, U.S.A.

6. Emerging Pathogens Institute, University of Florida, Gainesville, FL, U.S.A.

7. Department of Entomology, The Pennsylvania State University, University Park, PA, U.S.A.

8. International Agriculture and Development Graduate Program, College of Agricultural Sciences, The Pennsylvania State University, University Park, PA, U.S.A.

9. Department of Plant Pathology and Microbiology, Iowa State University, Ames, IA, U.S.A.

10. Department of Ecosystem Science and Management, The Pennsylvania State University, University Park, U.S.A.

11. Department of Food Science, The Pennsylvania State University, University Park, PA, U.S.A.

12. Boyce Thompson Institute, Ithaca, NY, U.S.A.

13. Agricultural Economics, Sociology, and Education Department, The Pennsylvania State University, University Park, PA, U.S.A.

14. Department of Plant Pathology, University of Minnesota, St. Paul, MN, U.S.A.

15. U.S. Geological Survey, Great Lakes Science Center, Ann Arbor, MI, U.S.A.

16. Department of Plant Pathology, University of California, Davis, CA, U.S.A.

17. Department of Veterinary Population Medicine, University of Minnesota, Saint Paul, MN, U.S.A.

18. Bellisario College of Communications, The Pennsylvania State University, University Park, PA, U.S.A.

19. Department of Microbiology and Molecular Genetics, Michigan State University, East Lansing, MI, U.S.A.

20. The Plant Resilience Institute, Michigan State University, East Lansing, MI, U.S.A.

21. The DOE Great Lakes Bioenergy Research Center, Michigan State University, East Lansing, MI, U.S.A.

22. Department of Plant, Soil and Microbial Sciences; and Program in Ecology, Evolutionary Biology and Behavior, Michigan State University, East Lansing, MI, U.S.A.

23. Department of Entomology, Cornell University, Cornell AgriTech at the New York State Agricultural Experiment Station, Geneva, NY, U.S.A.

24. Centre INRS-Institut Armand-Frappier, Institut National de la Recherche Scientifique, Laval, QC, Canada

Abstract

This white paper presents a series of perspectives on current and future phytobiome management, discussed at the Wild and Tamed Phytobiomes Symposium in University Park, PA, U.S.A., in June 2018. To enhance plant productivity and health, and to translate lab- and greenhouse-based phytobiome research to field applications, the academic community and end-users need to address a variety of scientific, practical, and social challenges. Prior discussion of phytobiomes has focused heavily on plant-associated bacterial and fungal assemblages, but the phytobiomes concept covers all factors that influence plant function. Here we discuss various management considerations, including abiotic conditions (e.g., soil and nutrient applications), microorganisms (e.g., bacterial and fungal assemblages, bacterial and fungal inoculants, and viruses), macroorganisms (e.g., arthropods and plant genetics), and societal factors (e.g., communication approaches and technology diffusion). An important near-term goal for this field should be to estimate the potential relative contribution of different components of the phytobiome to plant health, as well as the potential and risk of modifying each in the near future.

Publisher

Scientific Societies

Subject

Plant Science,Agronomy and Crop Science,Molecular Biology,Ecology,Ecology, Evolution, Behavior and Systematics

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