The Impact of Stand Age and Fertilization on the Soil Microbiome of Miscanthus × giganteus

Author:

Ma Lanying12,Rocha Fernando Igne13,Lee Jaejin12,Choi Jinlyung12,Tejera Mauricio4,Sooksa-Nguan Thanwalee12,Boersma Nicholas24,VanLoocke Andy24,Heaton Emily24,Howe Adina12ORCID

Affiliation:

1. Department of Agricultural and Biosystems Engineering, Iowa State University, Ames, IA, U.S.A.

2. Center for Advanced Bioenergy and Bioproducts Innovation, Urbana, IL, U.S.A.

3. Department of Soil, Universidade Federal Rural do Rio de Janeiro, Seropédica, Brazil

4. Department of Agronomy, Iowa State University, Ames, IA, U.S.A.

Abstract

Yield of the perennial grass Miscanthus × giganteus has shown an inconsistent and unpredictable response to nitrogen (N) fertilizer, yet fertilization underpins the crop’s environmental and economic sustainability. The interactions among soil microbial communities, N availability, and Miscanthus × giganteus and management may explain changes in plant productivity. In this study, soil samples from different stand ages of Miscanthus × giganteus in a replicated chronosequence field trial were used to investigate the effects of stand age and N fertilizer rates on microbial community structure. We hypothesized that there is a definable Miscanthus × giganteus soil microbiome and that this community varies significantly with stand age and fertilization. Our results showed that the main phyla in soil microbial communities, regardless of plant age, are similar but microbial community structures are significantly different. The variation in observed microbial communities generally decreases with older stand ages. The amount of N fertilizer applied also affected the microbial community structure associated with different aged Miscanthus × giganteus. Specifically, the relative abundance of Proteobacteria (Alphaproteobacteria and Gammaproteobacteria) and Acidobacteria (subgroup Gp1) increased shortly after fertilization and was more associated with younger Miscanthus × giganteus. Furthermore, our results show a significant relationship between bacterial α diversity and fertilization rates and that this response is also affected by stand age. Overall, our results emphasize linkages between microbial community structure, plant age, and fertilization in Miscanthus × giganteus. [Formula: see text] Copyright © 2021 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license .

Funder

U.S. DOE, Office of Science, Office of Biological and Environmental Research

United States Department of Agriculture (USDA) National Institute of Food and Agriculture

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior, Brazil

Publisher

Scientific Societies

Subject

Plant Science,Agronomy and Crop Science,Molecular Biology,Ecology,Ecology, Evolution, Behavior and Systematics

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