PZLAST: an ultra-fast sequence similarity search tool implemented on a MIMD processor-Reference-Cited by-同舟云学术

PZLAST: an ultra-fast sequence similarity search tool implemented on a MIMD processor

Published:2022 Issue:2 Volume:12 Page:446-466
ISSN:2185-2839
Container-title:International Journal of Networking and Computing
language:en
Short-container-title:IJNC

Author:

Ishikawa Hitoshi¹,Mori Hiroshi²,Higashi Koichi²,Kato Yoshiaki³,Sakai Tomofumi⁴,Ebisuzaki Toshikazu³,Kurokawa Ken²

Affiliation:

1. PEZY Computing, K.K.

2. National Institute of Genetics

3. RIKEN

4. Infinite Curation, Inc

Publisher

IJNC Editorial Committee

Subject

General Medicine

Link

https://www.jstage.jst.go.jp/article/ijnc/12/2/12_446/_pdf

Reference8 articles.

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2. [2] Mori H., Ishikawa H., Higashi K., Kato Y., Ebisuzaki T., and Kurokawa K. PZLAST: an ultra-fast amino acid sequence similarity search server against public metagenomes. Bioinformatics, 37(21):3944–3946, 2021. https://doi.org/10.1093/bioinformatics/btab492.

3. [3] Illumina Inc. Introduction to NGS. https://www.illumina.com/science/technology/next-generationsequencing.html (Retrieved on Jun 30, 2021).

4. [4] Yano M., Mori H., and Akiyama Y. et al. CLAST: CUDA implemented large-scale alignment search tool. BMC Bioinformatics, 15(406), 2014. https://doi.org/10.1186/s12859-014-0406-y.

5. [5] Torii S. and Ishikawa H. ZettaScaler: Liquid immersion cooling Many-core based Supercomputer. https://www.pezy.co.jp/wpcontent/uploads/2019/02/Keynote_candar2017.pdf (Retrieved on Jun 30, 2021).

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