Time-consistent reconciliation maps and forbidden time travel-Reference-Cited by-同舟云学术

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Time-consistent reconciliation maps and forbidden time travel

Published:2018-02-06 Issue:1 Volume:13 Page:
ISSN:1748-7188
Container-title:Algorithms for Molecular Biology
language:en
Short-container-title:Algorithms Mol Biol

Author:

Nøjgaard Nikolai,Geiß Manuela,Merkle Daniel,Stadler Peter F.,Wieseke Nicolas,Hellmuth Marc

Funder

Danmarks Frie Forskningsfond

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computational Theory and Mathematics,Molecular Biology,Structural Biology

Link

http://link.springer.com/content/pdf/10.1186/s13015-018-0121-8.pdf

Reference44 articles.

1. Dress A, Moulton V, Steel M, Wu T. Species, clusters and the ‘tree of life’: a graph-theoretic perspective. J Theor Biol. 2010;265:535–42.

2. Fitch WM. Homology: a personal view on some of the problems. Trends Genet. 2000;16:227–31.

3. Hellmuth M, Stadler PF, Wieseke N. The mathematics of xenology: di-cographs, symbolic ultrametrics, 2-structures and tree- representable systems of binary relations. J Math Biol. 2016;75(1):199–237. https://doi.org/10.1007/s00285-016-1084-3 .

4. Hellmuth M, Wieseke N. From sequence data including orthologs, paralogs, and xenologs to gene and species trees. In: Pontarotti P, editor. Evolutionary Biology: convergent evolution, evolution of complex traits, concepts and methods. Cham: Springer; 2016. p. 373–92.

5. Guigó R, Muchnik I, Smith T. Reconstruction of ancient molecular phylogeny. Mol Phylogenet Evol. 1996;6:189–213.

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