IRcall and IRclassifier: two methods for flexible detection of intron retention events from RNA-Seq data
Author:
Publisher
Springer Science and Business Media LLC
Subject
Genetics,Biotechnology
Link
https://link.springer.com/content/pdf/10.1186/1471-2164-16-S2-S9.pdf
Reference22 articles.
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2. Pan Q, Shai O, Lee LJ, Frey BJ, Blencowe BJ: Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing. Nature Genetics. 2008, 40: 1413-1415. 10.1038/ng.259.
3. Nilsen TW, Graveley BR: Expansion of the eukaryotic proteome by alternative splicing. Nature. 2010, 463: 457-463. 10.1038/nature08909.
4. Matlin AJ, Clark F, Smith CWJ: Understanding alternative splicing: towards a cellular code. Nature Reviews Molecular Cell Biology. 2005, 6: 386-398. 10.1038/nrm1645.
5. Ner-Gaon H, Fluhr R: Whole-genome microarray in arabidopsis facilitates global analysis of retained introns. DNA Research. 2006, 13: 111-121. 10.1093/dnares/dsl003.
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