Boolean regulatory network reconstruction using literature based knowledge with a genetic algorithm optimization method
Author:
Publisher
Springer Science and Business Media LLC
Subject
Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology
Link
http://link.springer.com/content/pdf/10.1186/s12859-016-1287-z.pdf
Reference26 articles.
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3. Knapp B, Kaderali L. Reconstruction of cellular signal transduction networks using perturbation assays and linear programming. PLoS One. 2013;8:e69220.
4. Breindl C, Chaves M, Allgower F. A linear reformulation of Boolean optimization problems and structure identification of gene regulation networks. In: 52nd IEEE Conference on Decision and Control. IEEE. 2013. p. 733–8.
5. Videla S, Guziolowski C, Eduati F, Thiele S, Gebser M, Nicolas J, Saez-Rodriguez J, Schaub T, Siegel A. Learning Boolean logic models of signaling networks with ASP. Theor Comput Sci. 2015;599:79–101.
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