WGDdetector: a pipeline for detecting whole genome duplication events using the genome or transcriptome annotations-Reference-Cited by-同舟云学术

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WGDdetector: a pipeline for detecting whole genome duplication events using the genome or transcriptome annotations

Published:2019-02-13 Issue:1 Volume:20 Page:
ISSN:1471-2105
Container-title:BMC Bioinformatics
language:en
Short-container-title:BMC Bioinformatics

Author:

Yang Yongzhi,Li Ying,Chen Qiao,Sun Yongshuai,Lu Zhiqiang

Funder

“1000 Youth Talents Plan” of Yunnan Province

CAS “Light of West China” Program

start-up research fund of Lanzhou University to YY

start-up research fund of XTBG to ZL

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Link

http://link.springer.com/content/pdf/10.1186/s12859-019-2670-3.pdf

Reference44 articles.

1. del Pozo JC, Ramirez-Parra E. Whole genome duplications in plants: an overview from Arabidopsis. J Exp Bot. 2015;66(22):6991–7003.

2. Van de Peer Y, Mizrachi E, Marchal K. The evolutionary significance of polyploidy. Nat Rev Genet. 2017;18(7):411–24.

3. Wendel JF. The wondrous cycles of polyploidy in plants. Am J Bot. 2015;102(11):1753–6.

4. Jiao Y, Wickett NJ, Ayyampalayam S, Chanderbali AS, Landherr L, Ralph PE, Tomsho LP, Hu Y, Liang H, Soltis PS, et al. Ancestral polyploidy in seed plants and angiosperms. Nature. 2011;473(7345):97–100.

5. Li Z, Baniaga AE, Sessa EB, Scascitelli M, Graham SW, Rieseberg LH, Barker MS. Early genome duplications in conifers and other seed plants. Sci Adv. 2015;1(10):e1501084.

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