A method for positive forensic identification of samples from extremely low-coverage sequence data-Reference-Cited by-同舟云学术

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A method for positive forensic identification of samples from extremely low-coverage sequence data

Published:2015-12 Issue:1 Volume:16 Page:
ISSN:1471-2164
Container-title:BMC Genomics
language:en
Short-container-title:BMC Genomics

Author:

Vohr Samuel H.,Buen Abad Najar Carlos Fernando,Shapiro Beth,Green Richard E.

Funder

Smithsonian Institution

Gordon and Betty Moore Foundation

COMEXUS

Publisher

Springer Science and Business Media LLC

Subject

Genetics,Biotechnology

Link

http://link.springer.com/content/pdf/10.1186/s12864-015-2241-6.pdf

Reference38 articles.

1. Shapiro B, Hofreiter M. A Paleogenomic Perspective on Evolution and Gene Function: New Insights from Ancient DNA. Science (80-). 2014;343:1236573.

2. Meyer M, Kircher M, Gansauge M-T, Li H, Racimo F, Mallick S, et al. A high-coverage genome sequence from an archaic Denisovan individual. Science. 2012;338:222–6.

3. Prüfer K, Racimo F, Patterson N, Jay F, Sankararaman S, Sawyer S, et al. The complete genome sequence of a Neanderthal from the Altai Mountains. Nature. 2014;505:43–9.

4. Lazaridis I, Patterson N, Mittnik A, Renaud G, Mallick S, Kirsanow K, et al. Ancient human genomes suggest three ancestral populations for present-day Europeans. Nature. 2014;513:409–13.

5. Skoglund P, Malmstrom H, Raghavan M, Stora J, Hall P, Willerslev E, et al. Origins and Genetic Legacy of Neolithic Farmers and Hunter-Gatherers in Europe. Science (80-). 2012;336:466–9.

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2. A computational approach for positive genetic identification and relatedness detection from low-coverage shotgun sequencing data;Journal of Heredity;2023-06-29

3. Haplotype-aware inference of human chromosome abnormalities;Proceedings of the National Academy of Sciences;2021-11-12

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5. ContamLD: estimation of ancient nuclear DNA contamination using breakdown of linkage disequilibrium;Genome Biology;2020-08-10

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