A compact, in vivo screen of all 6-mers reveals drivers of tissue-specific expression and guides synthetic regulatory element design-Reference-Cited by-同舟云学术

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A compact, in vivo screen of all 6-mers reveals drivers of tissue-specific expression and guides synthetic regulatory element design

Published:2013 Issue:7 Volume:14 Page:R72
ISSN:1465-6906
Container-title:Genome Biology
language:en
Short-container-title:Genome Biol

Author:

Smith Robin P,Riesenfeld Samantha J,Holloway Alisha K,Li Qiang,Murphy Karl K,Feliciano Natalie M,Orecchia Lorenzo,Oksenberg Nir,Pollard Katherine S,Ahituv Nadav

Publisher

Springer Science and Business Media LLC

Reference45 articles.

1. A plethora of sites

2. Diversity and Complexity in DNA Recognition by Transcription Factors

3. Compact, universal DNA microarrays to comprehensively determine transcription-factor binding site specificities

4. Genomic views of distant-acting enhancers

5. rVISTA 2.0: evolutionary analysis of transcription factor binding sites

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1. A survey of k-mer methods and applications in bioinformatics;Computational and Structural Biotechnology Journal;2024-12

2. Beyond modular enhancers: new questions in cis-regulatory evolution;Trends in Ecology & Evolution;2024-09

3. Emergence of enhancers at late DNA replicating regions;Nature Communications;2024-04-24

4. Decoding enhancer complexity with machine learning and high-throughput discovery;Genome Biology;2023-05-12

5. Enhancer architecture and chromatin accessibility constrain phenotypic space during Drosophila development;Developmental Cell;2023-01

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