High-quality genome assembly of channel catfish, Ictalurus punctatus-Reference-Cited by-同舟云学术

High-quality genome assembly of channel catfish, Ictalurus punctatus

Published:2016-08-22 Issue:1 Volume:5 Page:
ISSN:2047-217X
Container-title:GigaScience
language:en
Short-container-title:GigaSci

Author:

Chen Xiaohui,Zhong Liqiang,Bian Chao,Xu Pao,Qiu Ying,You Xinxin,Zhang Shiyong,Huang Yu,Li Jia,Wang Minghua,Qin Qin,Zhu Xiaohua,Peng Chao,Wong Alex,Zhu Zhifei,Wang Min,Gu Ruobo,Xu Junmin,Shi Qiong,Bian Wenji

Funder

Independent Innovation on Agriculture Science and Technology of Jiangsu Province

Project of Human Resources and Social Security of Jiangsu Province

Three New Project for Aquaculture in Jiangsu Province

Zhenjiang Leading Talent Program for Innovation and Entrepreneurship

National Key Technology R D Program of China

Shenzhen Special Program for Future Industrial Development

Publisher

Oxford University Press (OUP)

Subject

Computer Science Applications,Health Informatics

Link

http://academic.oup.com/gigascience/article-pdf/5/1/1/10843909/13742_2016_Article_142.pdf

Reference27 articles.

1. You X, Bian C, Zan Q, Xu X, Liu X, Chen J, et al. Mudskipper genomes provide insights into the terrestrial adaptation of amphibious fishes. Nat Commun. 2014;5:5594.

2. Li R, Fan W, Tian G, Zhu H, He L, Cai J, et al. The sequence and de novo assembly of the giant panda genome. Nature. 2010;463(7279):311–7.

3. Liu Z, Liu S, Yao J, Bao L, Zhang J, Li Y, et al. The channel catfish genome sequence provides insights into the evolution of scale formation in teleosts. Nat Commun. 2016;7:11757.

4. Luo R, Liu B, Xie Y, Li Z, Huang W, Yuan J, et al. SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler. GigaScience. 2012;1:12.

5. Grabherr MG, Haas BJ, Yassour M, Levin JZ, Thompson DA, Amit I, et al. Trinity: reconstructing a full-length transcriptome without a genome from RNA-Seq data. Nat Biotechnol. 2011;29(7):644–52.

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