Reconstruction of viral population structure from next-generation sequencing data using multicommodity flows-Reference-Cited by-同舟云学术

Reconstruction of viral population structure from next-generation sequencing data using multicommodity flows

Published:2013-06 Issue:S9 Volume:14 Page:
ISSN:1471-2105
Container-title:BMC Bioinformatics
language:en
Short-container-title:BMC Bioinformatics

Author:

Skums Pavel,Mancuso Nicholas,Artyomenko Alexander,Tork Bassam,Mandoiu Ion,Khudyakov Yury,Zelikovsky Alex

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Link

http://link.springer.com/content/pdf/10.1186/1471-2105-14-S9-S2.pdf

Reference21 articles.

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3. Beerenwinkel N, Zagordi O: Ultra-deep sequencing for the analysis of viral populations. Curr Opin Virol. 2011, 1 (5): 413-8. 10.1016/j.coviro.2011.07.008.

4. Beerenwinkel N, Günthard HF, Roth V, Metzner KJ: Challenges and opportunities in estimating viral genetic diversity from next-generation sequencing data. Front Microbiol. 2012, 3: 329-

5. Skums P, Campo D, Dimitrova Z, Vaughan G, Lau D, Khudyakov Y: Numerical detection, measuring and analysis of differential interferon resistance for individual HCV intra-host variants and its influence on the therapy response. In Silico Biology. 2011, 11: 1-7.

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