A verification protocol for the probe sequences of Affymetrix genome arrays reveals high probe accuracy for studies in mouse, human and rat-Reference-Cited by-同舟云学术

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A verification protocol for the probe sequences of Affymetrix genome arrays reveals high probe accuracy for studies in mouse, human and rat

Published:2007-04-20 Issue:1 Volume:8 Page:
ISSN:1471-2105
Container-title:BMC Bioinformatics
language:en
Short-container-title:BMC Bioinformatics

Author:

Alberts Rudi,Terpstra Peter,Hardonk Menno,Bystrykh Leonid V,de Haan Gerald,Breitling Rainer,Nap Jan-Peter,Jansen Ritsert C

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Link

http://link.springer.com/content/pdf/10.1186/1471-2105-8-132.pdf

Reference27 articles.

1. Lockhart DJ, Dong H, Byrne MC, Follettie MT, Gallo MV, Chee MS, Mittmann M, Wang C, Kobayashi M, Horton H, Brown EL: Expression monitoring by hybridization to high-density oligonucleotide arrays. Nat Biotechnol 1996, 14: 1675–1680. 10.1038/nbt1296-1675

2. Zhang L, Miles MF, Aldape KD: A model of molecular interactions on short oligonucleotide microarrays. Nat Biotechnol 2003, 21: 818–821. 10.1038/nbt836

3. Wu Z, Irizarry RA: Preprocessing of oligonucleotide array data. Nat Biotechnol 2004, 22: 656–658. 10.1038/nbt0604-656b

4. Alberts R, Terpstra P, Bystrykh LV, de Haan G, Jansen RC: A statistical multiprobe model for analyzing cis and trans genes in genetical genomics experiments with short-oligonucleotide arrays. Genetics 2005, 171: 1437–1439. 10.1534/genetics.105.045930

5. Jansen RC, Nap JP: Genetical genomics: the added value from segregation. Trends Genet 2001, 17: 388–391. 10.1016/S0168-9525(01)02310-1

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