Optimizing graph-based patterns to extract biomedical events from the literature-Reference-Cited by-同舟云学术

Optimizing graph-based patterns to extract biomedical events from the literature

Published:2015-10-30 Issue:S16 Volume:16 Page:
ISSN:1471-2105
Container-title:BMC Bioinformatics
language:en
Short-container-title:BMC Bioinformatics

Author:

Liu Haibin,Verspoor Karin,Comeau Donald C,MacKinlay Andrew D,Wilbur W John

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Link

https://link.springer.com/content/pdf/10.1186/1471-2105-16-S16-S2.pdf

Reference40 articles.

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2. Kim JD, Pyysalo S, Ohta T, Bossy R, Nguyen N, Tsujii J: Overview of BioNLP shared task 2011. Proceedings of BioNLP Shared Task 2011 Workshop. 2011, Association for Computational Linguistics, Morristown, NJ, USA, 1-6.

3. Ananiadou S, Pyysalo S, Tsujii J, Kell DB: Event extraction for systems biology by text mining the literature. Trends in Biotechnology. 2010, 28 (7): 381-390.

4. Liu H, Hunter L, Keselj V, Verspoor K: Approximate subgraph matching-based literature mining for biomedical events and relations. PLOS ONE. 2013, 8: 4 e60954-[http://asmalgorithm.sourceforge.net]

5. Zhang Y, Lin H, Yang Z, Wang J, Li Y: A single kernel-based approach to extract drug-drug interactions from biomedical literature. PLOS ONE. 2012, 7 (11): e48901-

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