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Bio::Homology::InterologWalk - A Perl module to build putative protein-protein interaction networks through interolog mapping

  • Published:2011-07-18 Issue:1 Volume:12 Page:
  • ISSN:1471-2105
  • Container-title:BMC Bioinformatics
  • language:en
  • Short-container-title:BMC Bioinformatics

Author:

Gallone Giuseppe,Simpson T Ian,Armstrong J Douglas,Jarman Andrew P

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Reference55 articles.

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2. Giot L, Bader JS, Brouwer C, Chaudhuri A, Kuang B, Li Y, Hao YL, Ooi CE, Godwin B, Vitols E, Vijayadamodar G, Pochart P, Machineni H, Welsh M, Kong Y, Zerhusen B, Malcolm R, Varrone Z, Collis A, Minto M, Burgess S, McDaniel L, Stimpson E, Spriggs F, Williams J, Neurath K, Ioime N, Agee M, Voss E, Furtak K, Renzulli R, Aanensen N, Carrolla S, Bickelhaupt E, Lazovatsky Y, DaSilva A, Zhong J, Stanyon CA, Finley JRL, White KP, Braverman M, Jarvie T, Gold S, Leach M, Knight J, Shimkets RA, McKenna MP, Chant J, Rothberg JM: A Protein Interaction Map of Drosophila melanogaster. Science 2003, 302(5651):1727–1736. [ http://www.sciencemag.org/cgi/content/abstract/302/5651/1727 ] 10.1126/science.1090289

3. Li S, Armstrong CM, Bertin N, Ge H, Milstein S, Boxem M, Vidalain PO, Han JDJ, Chesneau A, Hao T, Goldberg DS, Li N, Martinez M, Rual JF, Lamesch P, Xu L, Tewari M, Wong SL, Zhang LV, Berriz GF, Jacotot L, Vaglio P, Reboul J, Hirozane-Kishikawa T, Li Q, Gabel HW, Elewa A, Baumgartner B, Rose DJ, Yu H, Bosak S, Sequerra R, Fraser A, Mango SE, Saxton WM, Strome S, van den Heuvel S, Piano F, Vandenhaute J, Sardet C, Gerstein M, Doucette-Stamm L, Gunsalus KC, Harper JW, Cusick ME, Roth FP, Hill DE, Vidal M: A Map of the Interactome Network of the Metazoan C. elegans. Science 2004, 303(5657):540–543. [ http://www.sciencemag.org/cgi/content/abstract/303/5657/540 ] 10.1126/science.1091403

4. LaCount DJ, Vignali M, Chettier R, Phansalkar A, Bell R, Hesselberth JR, Schoenfeld LW, Ota I, Sahasrabudhe S, Kurschner C, Fields S, Hughes RE: A protein interaction network of the malaria parasite Plasmodium falciparum. Nature 2005, 438(7064):103–107. 10.1038/nature04104

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