Measuring the reproducibility and quality of Hi-C data
Author:
Funder
National Institutes of Health
Howard Hughes Medical Institute
Publisher
Springer Science and Business Media LLC
Link
http://link.springer.com/content/pdf/10.1186/s13059-019-1658-7.pdf
Reference48 articles.
1. Lieberman-Aiden E, van Berkum NL, Williams L, Imakaev M, Ragoczy T, Telling A, et al. Comprehensive mapping of long-range interactions reveals folding principles of the human genome. Science. 2009;326:289–93.
2. Dixon JR, Jung I, Selvaraj S, Shen Y, Antosiewicz-Bourget JE, Lee AY, et al. Chromatin architecture reorganization during stem cell differentiation. Nature. 2015;518:331–6.
3. Krijger PHL, Di Stefano B, De Wit E, Limone F, Van Oevelen C, De Laat W, et al. Cell-of-origin-specific 3D genome structure acquired during somatic cell reprogramming. Cell Stem Cell. 2016;18:597–610.
4. Ma W, Ay F, Lee C, Gulsoy G, Deng X, Cook S, et al. Fine-scale chromatin interaction maps reveal the cis-regulatory landscape of lincRNA genes in human cells. Nat Methods. 2015;12:71–8.
5. Giorgetti L, Lajoie BR, Carter AC, Attia M, Zhan Y, Xu J, et al. Structural organization of the inactive X chromosome in the mouse. Nature. 2016;535:575–9.
Cited by 122 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献
1. Nucleotide excision repair of aflatoxin-induced DNA damage within the 3D human genome organization;Nucleic Acids Research;2024-09-11
2. Stepwise de novo establishment of inactive X chromosome architecture in early development;Nature Genetics;2024-09-10
3. A technique for preserving network structure in randomized Hi-C data;Journal of Bioinformatics and Computational Biology;2024-08-24
4. ENT3C: an entropy-based similarity measure for Hi-C and micro-C derived contact matrices;NAR Genomics and Bioinformatics;2024-07-02
5. Predicting gene expression state and prioritizing putative enhancers using 5hmC signal;Genome Biology;2024-06-03
1.学者识别学者识别
2.学术分析学术分析
3.人才评估人才评估
"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370
www.globalauthorid.com
TOP
Copyright © 2019-2024 北京同舟云网络信息技术有限公司 京公网安备11010802033243号 京ICP备18003416号-3