Comparisons of Shewanella strains based on genome annotations, modeling, and experiments-Reference-Cited by-同舟云学术

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Comparisons of Shewanella strains based on genome annotations, modeling, and experiments

Published:2014-03-12 Issue:1 Volume:8 Page:
ISSN:1752-0509
Container-title:BMC Systems Biology
language:en
Short-container-title:BMC Syst Biol

Author:

Ong Wai Kit,Vu Trang T,Lovendahl Klaus N,Llull Jenna M,Serres Margrethe H,Romine Margaret F,Reed Jennifer L

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Modelling and Simulation,Structural Biology

Link

https://link.springer.com/content/pdf/10.1186/1752-0509-8-31.pdf

Reference21 articles.

1. Nealson KH, Scott J: Ecophysiology of the Genus Shewanella. Prokaryotes: A Handbook on the Biology of Bacteria, Vol 6. Third edition. 2006, New York, NY: Springer, 1133-1151.

2. Fredrickson JK, Romine MF, Beliaev AS, Auchtung JM, Driscoll ME, Gardner TS, Nealson KH, Osterman AL, Pinchuk G, Reed JL, Rodionov DA, Rodrigues JLM, Saffarini DA, Serres MH, Spormann AM, Zhulin IB, Tiedje JM: Towards environmental systems biology of Shewanella. Nat Rev Microbiol. 2008, 6: 592-603. 10.1038/nrmicro1947.

3. Rodionov DA, Yang C, Li XQ, Rodionova IA, Wang YB, Obraztsova AY, Zagnitko OP, Overbeek R, Romine MF, Reed S, Fredrickson JK, Nealson KH, Osterman AL: Genomic encyclopedia of sugar utilization pathways in the Shewanella genus. BMC Genomics. 2010, 11: 494-10.1186/1471-2164-11-494.

4. Deutschbauer A, Price MN, Wetmore KM, Shao WJ, Baumohl JK, Xu ZC, Nguyen M, Tamse R, Davis RW, Arkin AP: Evidence-based annotation of gene function in Shewanella oneidensis MR-1 using genome-wide fitness profiling across 121 conditions. Plos Genetics. 2011, 7 (11): e1002385-10.1371/journal.pgen.1002385.

5. Nealson KH, Belz A, McKee B: Breathing metals as a way of life: geobiology in action. Anton Leeuw Int J G. 2002, 81: 215-222. 10.1023/A:1020518818647.

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