Investigating the Diurnal Radiative, Turbulent, and Biophysical Processes in the Amazonian Canopy‐Atmosphere Interface by Combining LES Simulations and Observations

Author:

Pedruzo‐Bagazgoitia X.12ORCID,Patton E. G.3ORCID,Moene A. F.2,Ouwersloot H. G.2ORCID,Gerken T.4ORCID,Machado L. A. T.56,Martin S. T.7ORCID,Sörgel M.8ORCID,Stoy P. C.9ORCID,Yamasoe M. A.10ORCID,Vilà‐Guerau de Arellano J.28ORCID

Affiliation:

1. ECMWF Bonn Germany

2. Meteorology and Air Quality Section Wageningen University Research Wageningen The Netherlands

3. National Center for Atmospheric Research Boulder CO USA

4. School of Integrated Sciences James Madison University Harrisonburg VA USA

5. Multiphase Chemistry Department Max Planck Institute for Chemistry Mainz Germany

6. Instituto de Física Universidade de São Paulo São Paulo Brazil

7. School of Engineering and Applied Sciences Harvard University Cambridge MA USA

8. Atmospheric Chemistry Department Max Plank Institute for Chemistry Mainz Germany

9. Department of Biological Systems Engineering University of Wisconsin‐Madison Madison WI USA

10. Departamento de Ciências Atmosféricas Instituto de Astronomia Geofísica e Ciências Atmosféricas Universidade de São Paulo Cidade Universitária São Paulo Brazil

Abstract

AbstractWe investigate the atmospheric diurnal variability inside and above the Amazonian rainforest for a representative day during the dry season. To this end, we combine high‐resolution large‐eddy simulations that are constrained and evaluated against a comprehensive observation set, including CO2 concentrations, gathered during GoAmazon2014/15. We design systematic numerical experiments to quantify whether a multilayer approach in solving the explicit canopy improves our canopy‐atmosphere representation. We particularly focus on the relationship between photosynthesis and plant transpiration, and their distribution at leaf and canopy scales. We found the variability of photosynthesis drivers like vapor pressure deficit and leaf temperature to be about 3 times larger for sunlit leaves compared to shaded leaves. This leads to a large spread on leaf stomatal conductance values with minimum and maximum values varying more than 100%. Regarding the turbulent structure, we find wind‐driven stripe‐like shapes at the canopy top and structures resembling convective cells at the canopy. Wind‐related variables provide the best spatiotemporal agreement between model and observations. The potential temperature and heat flux profiles agree with an observed decoupling near the canopy top interface, although with less variability and cold biases of up to 3 K. The increasing complexity on the biophysical processes leads to the largest disagreements for evaporation, CO2 plant assimilation and soil efflux. The model is able to capture the correct dependences and trends with the magnitudes still differing. We finally discuss the need to revise leaf and soil models and to complete the observations at leaf and canopy levels.

Funder

U.S. Department of Energy

Fundação de Amparo à Pesquisa do Estado de São Paulo

Fundação de Amparo à Pesquisa do Estado do Amazonas

Instituto Nacional de Pesquisas da Amazônia

National Center for Atmospheric Research

National Science Foundation

Publisher

American Geophysical Union (AGU)

Subject

General Earth and Planetary Sciences,Environmental Chemistry,Global and Planetary Change

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